Factsheet for Zm00001d020172_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G056600.2	Barley	cytosol	13.64	88.37
GSMUA_Achr4P15520_001	Banana	cytosol	71.81	71.81
KXG35455	Sorghum	plasma membrane	95.51	51.5
TraesCS5A01G186500.1	Wheat	plasma membrane	85.46	47.08
TraesCS5B01G184900.1	Wheat	plasma membrane	85.28	46.89
TraesCS5D01G191800.1	Wheat	plasma membrane	84.38	46.4
HORVU5Hr1G056670.6	Barley	plasma membrane	83.84	46.01
Zm00001d002312_P004	Maize	cytosol	42.37	41.04
VIT_12s0028g01350.t01	Wine grape	plasma membrane	65.17	35.91
KRH73704	Soybean	plasma membrane	64.45	35.02
Bra018693.1-P	Field mustard	plasma membrane	62.3	34.7
CDX93632	Canola	plasma membrane	62.66	34.49
CDX95138	Canola	plasma membrane	62.3	34.29
AT1G07650.2	Thale cress	plasma membrane	62.66	34.22
KRH14451	Soybean	plasma membrane	62.84	34.08
Zm00001d016242_P002	Maize	plasma membrane	52.78	33.41
PGSC0003DMT400044535	Potato	plasma membrane	60.68	32.91
Solyc07g055810.2.1	Tomato	plasma membrane	60.5	32.81
Os09t0345300-01	Rice	plasma membrane	34.29	27.05
Zm00001d026303_P004	Maize	cytosol	42.19	23.36
Zm00001d026306_P009	Maize	plasma membrane	43.09	23.35
Zm00001d024291_P001	Maize	mitochondrion, nucleus, plasma membrane, plastid	42.01	22.08
Zm00001d002313_P003	Maize	extracellular, plasma membrane	4.49	4.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	UniProt:A0A1D6I2K1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:Malectin	ProteinID:ONM54396.1	PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000844B9EE
EnsemblPlantsGene:Zm00001d020172	EnsemblPlants:Zm00001d020172_P001	EnsemblPlants:Zm00001d020172_T001	SEG:seg	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase

Coordinates

chr7:+:97251945..97256687

Molecular Weight (calculated)

61259.4 Da

IEP (calculated)

7.245

GRAVY (calculated)

-0.079

Length

557 amino acids

Sequence
(BLAST)

001: MDDNINDDNY IATSASKLAV PNSDLYNKAR LSPLSLTYYG LCMLSGSYTV NLHFAEIVFT NDSTYYSLGK RRFNVFIQGR MVLEDFDIEQ SSGAAAKPVT
101: KTFQTYVTNH TLEIQFYWAG RGTTGIPYRG SYGPLISAIS VTPNFQIPLA VDPPKAGSRE KRSSRASIAL GIGIPIVAIF TALILGIYCI KKQRKSSMHE
201: ELRALDLQIG SFTLRQIKAA TRNFDAANKI GEGGFGSVYK GLLSDGTIIA VKQLSSRSKQ GNREFVNEIG MISALQHPNL VKLYGCCTEG NQLSLVYEYM
301: ENNCLARALF VEQYRLRMDW GTRHKICLGI AKGLAYLHEE SAIRIVHRDI KASNILLDKD LNAKISDFGL AKLNEDDHTH ISTKVAGTIG YMAPEYAMRG
401: YLTDKADVYS FGVVVLEIVS GKSNTNYRPK EDFVYLLDWA CVLHERGTLL ELVDPDLGSN YSTEEALLML NVALLCTTAA PTLRPKMSKV VSLLEGSAPL
501: QPLLSDLSLA ANSLSSSGVR RNFWQNPGES QSLTAQASCS DTNESSTIDI DGILLVS

Best Arabidopsis Sequence Match ( AT1G07650.4 )
(BLAST)

001: MRISDNNFTG PIPDFISNWT RILKLQMHGC GLDGPIPSSI SSLTSLTDLR ISDLGGKPSS FPPLKNLESI KTLILRKCKI IGPIPKYIGD LKKLKTLDLS
101: FNLLSGEIPS SFENMKKADF IYLTGNKLTG GVPNYFVERN KNVDVSFNNF TDESSIPSHD CNRVTSNLVE SFALGNKSHK GSTCFLQRMP CVHPKRYHLY
201: KLYINCGGGE VKVDKEITYQ ADDEPKGASM YVLGANKRWA LSSTGNFMDN DDDADEYTVQ NTSRLSVNAS SPSFGLYRTA RVSPLSLTYY GICLGNGNYT
301: VNLHFAEIIF TDDNTLYSLG KRLFDIYVQD QLVIKNFNIQ EAARGSGKPI IKSFLVNVTD HTLKIGLRWA GKGTTGIPIR GVYGPMISAI SVEPNFKPPV
401: YYDTKDIILK VGVPVAAATL LLFIIVGVFW KKRRDKNDID KELRGLDLQT GTFTLRQIKA ATDNFDVTRK IGEGGFGSVY KGELSEGKLI AVKQLSAKSR
501: QGNREFVNEI GMISALQHPN LVKLYGCCVE GNQLILVYEY LENNCLSRAL FGKDESSRLK LDWSTRKKIF LGIAKGLTFL HEESRIKIVH RDIKASNVLL
601: DKDLNAKISD FGLAKLNDDG NTHISTRIAG TIGYMAPEYA MRGYLTEKAD VYSFGVVALE IVSGKSNTNF RPTEDFVYLL DWAYVLQERG SLLELVDPTL
701: ASDYSEEEAM LMLNVALMCT NASPTLRPTM SQVVSLIEGK TAMQELLSDP SFSTVNPKLK ALRNHFWQNE LSRSLSFSTS GPRTASANSL VDAEEKTGLL
801: D

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.