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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018693.1-P Field mustard plasma membrane 98.22 99.4
CDX95138 Canola plasma membrane 98.02 98.02
AT1G07650.2 Thale cress plasma membrane 86.36 85.69
HORVU5Hr1G056600.2 Barley cytosol 6.42 75.58
CDY72653 Canola cytosol 16.6 67.74
VIT_12s0028g01350.t01 Wine grape plasma membrane 64.23 64.29
GSMUA_Achr4P15520_001 Banana cytosol 35.18 63.91
Zm00001d020172_P001 Maize cytosol, plasma membrane, plastid 34.49 62.66
KRH73704 Soybean plasma membrane 61.46 60.68
KRH14451 Soybean plasma membrane 60.97 60.08
PGSC0003DMT400044535 Potato plasma membrane 59.78 58.91
Solyc07g055810.2.1 Tomato plasma membrane 59.59 58.71
CDX77648 Canola cytosol 25.0 58.16
TraesCS5A01G186500.1 Wheat plasma membrane 54.94 55.0
TraesCS5B01G184900.1 Wheat plasma membrane 55.04 54.99
HORVU5Hr1G056670.6 Barley plasma membrane 54.84 54.68
TraesCS5D01G191800.1 Wheat plasma membrane 54.64 54.59
KXG35455 Sorghum plasma membrane 55.43 54.31
CDX94698 Canola plasma membrane 20.95 53.81
KXG35457 Sorghum plasma membrane 54.45 53.44
CDY49080 Canola cytosol 25.0 51.95
CDX75790 Canola peroxisome 47.43 51.12
CDX97605 Canola plasma membrane 46.05 50.82
CDY60204 Canola plasma membrane 51.19 49.62
CDX82464 Canola plasma membrane 47.73 49.59
CDX75792 Canola plasma membrane 47.63 49.49
CDX82466 Canola plasma membrane 49.8 49.41
CDY25853 Canola plasma membrane 50.79 49.23
CDX75791 Canola plasma membrane 49.11 48.97
CDX82465 Canola plasma membrane 49.11 48.97
CDX97606 Canola plasma membrane 49.31 48.92
CDY20088 Canola plasma membrane 49.21 48.87
CDX98497 Canola cytosol, plasma membrane, plastid 46.84 48.87
CDY43183 Canola mitochondrion, plasma membrane 42.49 48.86
Os09t0345300-01 Rice plasma membrane 33.89 48.58
CDX98501 Canola plasma membrane 48.72 48.33
CDY32338 Canola plasma membrane 49.01 48.2
CDX94703 Canola plasma membrane 41.11 48.04
CDY35283 Canola cytosol, plasma membrane, plastid 30.14 47.73
CDY43181 Canola cytosol 29.74 47.63
CDX81476 Canola cytosol 13.34 47.54
CDY28419 Canola mitochondrion, plasma membrane 39.13 47.26
CDY43187 Canola plasma membrane 46.64 47.11
CDX67411 Canola plasma membrane 32.71 46.62
CDX98146 Canola plasma membrane 45.95 46.5
CDX99849 Canola plasma membrane 46.34 46.48
CDY35293 Canola cytosol 37.06 46.47
CDX94701 Canola cytosol 32.71 46.36
CDY26317 Canola plasma membrane 46.34 46.3
CDX98148 Canola plasma membrane 46.34 46.12
CDY44292 Canola plasma membrane 44.96 46.05
CDY35284 Canola plasma membrane 46.05 45.78
CDX94692 Canola plasma membrane 44.76 45.57
CDX90208 Canola plasma membrane 45.55 45.46
CDY13695 Canola plasma membrane 45.75 45.3
CDX99848 Canola plasma membrane 45.55 45.24
CDY35279 Canola plasma membrane 44.76 44.67
CDY26316 Canola plasma membrane 44.86 44.64
CDX99850 Canola plasma membrane 44.86 44.64
CDY26319 Canola plasma membrane 44.57 44.39
CDX97610 Canola plasma membrane 49.01 43.85
CDX73325 Canola plasma membrane 41.7 42.45
CDY43185 Canola plasma membrane 44.96 42.4
CDY35292 Canola plasma membrane 45.36 40.95
CDY67675 Canola cytosol 5.04 39.53
CDY42407 Canola plasma membrane 40.22 39.4
CDY59119 Canola plasma membrane 39.03 39.34
CDX67736 Canola plasma membrane 39.03 39.34
CDX98288 Canola plasma membrane 38.93 39.24
CDY47811 Canola plasma membrane 39.33 39.21
CDY22357 Canola plasma membrane 39.23 39.11
CDY10508 Canola plasma membrane 39.82 39.01
CDY46490 Canola plasma membrane 38.64 38.48
CDY10509 Canola plasma membrane 38.93 38.36
CDY25239 Canola plasma membrane 34.78 38.1
CDY68250 Canola plasma membrane 38.14 37.99
CDY67674 Canola cytosol 27.37 37.58
CDY12693 Canola plasma membrane 34.88 35.19
CDY38804 Canola golgi, plasma membrane 21.15 33.49
CDY11604 Canola plasma membrane 20.55 32.55
CDX90205 Canola plasma membrane 45.75 26.38
CDY03757 Canola plasma membrane 39.43 19.53
CDY43003 Canola plasma membrane 39.23 18.92
CDX73324 Canola nucleus 0.4 12.9
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078DXK6
EnsemblPlants:CDX93632ProteinID:CDX93632ProteinID:CDX93632.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00156315001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:MalectinPFAM:PF07714PFAM:PF11721PFAM:PF13855PRINTS:PR00019
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF54InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE0853SEG:seg::
Description
BnaA06g04160D
Coordinates
chrLK031876:+:1003940..1010997
Molecular Weight (calculated)
112506.0 Da
IEP (calculated)
9.053
GRAVY (calculated)
-0.215
Length
1012 amino acids
Sequence
(BLAST)
0001: MISWLSKYCI IILFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGQ GSWVVTTYTS KEFESNITCD CSFLPLNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNYLTGSI PKEWASMRVE DLSFMGNRLS GPFPKVLTRL TTLRNLSLEG NLFSGQIPPE IKRMIHLERL HLPSNAFTGP
0201: LPKELALLQN LTDMRISDNN FTGRIPDFIG NWTSIMKLQL HGSGLDGPIP SSISALTSLT DLRISDLGGK PSPFPPLNNL DSIKTLILRK CNLNGEIPKY
0301: IGKLKKLKTL DLSFNQLTGE IPSTFENMKK ADFIYLTGNK LTGAIPSYFV NKNKNVDVSY NNFTDASTIT GSKCSDVTSN WVESFSTGNK SRKESSCYLH
0401: HIPCRLPKRD HKYNLYINCG GGELKVDKGT TYEADQNSKG PSMFFSVNHW AYSSTGNFMD NDDDADDYIV QNTSRLTVNA SSPSFGLYRT ARVSPSSLTY
0501: YGLCLGNGNY TVHLHFAEIT FTDDKTLYSL GKRLFDIYLQ DKLVIKNFNI QEAASGSGKP VIKSFRVNVT DHNVKIGLRW AGKGTTGIPI RGVYGPMISA
0601: ISVEPNFKPP VYHDKKEIIL KAGIPVAAAL LLLLIFGIFL KKRLDKNAID KELRNLDLQT GSFTLRQIKA ATDNFDATLK IGEGGFGSVY KGVLSEGKLI
0701: AVKQLSAKSR QGNREFVNEI GMISALQHPN LVKLYGCCVE GNQLILVYEY LENNCLSRAL FGKDVSARLK LDWSTRKKIC LGIAKGLTFL HEESRIKIVH
0801: RDIKASNVLL DKDLNAKISD FGLAKLNDDG NTHISTRIAG TVGYMAPEYA MRGYLTEKAD VYSFGVVALE IVSGKSNTNF RPSEEFVYLL DWAYVLQEKG
0901: CLLELVDPTL ASDYSEEEAM LMLNVALMCT NASPTLRPTM SQVVSLLEGK TAMQELLSDP SFSTVNPKLK ALRNHFWQNE FSRTLSFSTT SGPKTASANS
1001: QLDAEEKTGL LD
Best Arabidopsis Sequence Match ( AT1G07650.1 )
(BLAST)
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.