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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, plastid
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72653 Canola cytosol 33.49 86.29
CDX94698 Canola plasma membrane 49.45 80.2
CDY49080 Canola cytosol 58.06 76.18
CDY43181 Canola cytosol 73.4 74.21
Bra010816.1-P Field mustard plasma membrane 88.89 73.48
CDX73324 Canola nucleus 3.44 70.97
CDX94701 Canola cytosol 75.59 67.65
CDX67411 Canola plasma membrane 72.77 65.49
CDY35293 Canola cytosol 78.09 61.83
CDX77648 Canola cytosol 41.47 60.92
CDY28419 Canola mitochondrion, plasma membrane 76.84 58.59
CDX94703 Canola plasma membrane 77.0 56.81
CDY67674 Canola cytosol 64.63 56.04
CDY43183 Canola mitochondrion, plasma membrane 76.68 55.68
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 40.22 54.56
CDY26319 Canola plasma membrane 78.56 49.41
AT1G29720.1 Thale cress plasma membrane 78.72 49.36
CDY44292 Canola plasma membrane 76.21 49.29
CDX99848 Canola plasma membrane 78.4 49.17
CDY35284 Canola plasma membrane 77.93 48.92
CDY13695 Canola plasma membrane 77.46 48.43
CDX94692 Canola plasma membrane 74.49 47.89
CDX99849 Canola plasma membrane 75.12 47.57
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 43.35 47.27
CDY26317 Canola plasma membrane 74.65 47.09
CDX81476 Canola cytosol 19.87 44.72
CDX73325 Canola plasma membrane 68.54 44.06
CDY35292 Canola plasma membrane 71.67 40.86
VIT_10s0003g01990.t01 Wine grape plasma membrane 53.05 36.93
CDX98146 Canola plasma membrane 55.71 35.6
CDX98148 Canola plasma membrane 56.34 35.4
CDY43187 Canola plasma membrane 55.4 35.33
CDX97605 Canola plasma membrane 47.57 33.15
CDY43185 Canola plasma membrane 54.3 32.34
CDX75790 Canola peroxisome 46.95 31.95
CDX98497 Canola cytosol, plasma membrane, plastid 47.57 31.34
CDX98501 Canola plasma membrane 48.36 30.29
CDX93632 Canola plasma membrane 47.73 30.14
CDX95138 Canola plasma membrane 47.57 30.04
CDX97606 Canola plasma membrane 47.73 29.9
CDY20088 Canola plasma membrane 47.42 29.73
CDY35279 Canola plasma membrane 47.1 29.68
CDX82464 Canola plasma membrane 45.23 29.67
CDX82466 Canola plasma membrane 47.26 29.61
CDX75792 Canola plasma membrane 45.07 29.57
CDX90208 Canola plasma membrane 46.64 29.39
CDX82465 Canola plasma membrane 46.48 29.26
CDY32338 Canola plasma membrane 47.1 29.25
CDX75791 Canola plasma membrane 46.32 29.16
CDX99850 Canola plasma membrane 46.32 29.11
CDY26316 Canola plasma membrane 46.01 28.91
CDX90205 Canola plasma membrane 78.09 28.43
CDY60204 Canola plasma membrane 46.32 28.35
CDY25853 Canola plasma membrane 46.01 28.16
CDX97610 Canola plasma membrane 45.85 25.91
CDY25239 Canola plasma membrane 37.09 25.65
CDX98288 Canola plasma membrane 39.12 24.9
CDY59119 Canola plasma membrane 39.12 24.9
CDX67736 Canola plasma membrane 39.12 24.9
CDY42407 Canola plasma membrane 40.22 24.88
CDY68250 Canola plasma membrane 39.44 24.8
CDY10509 Canola plasma membrane 39.75 24.73
CDY46490 Canola plasma membrane 39.28 24.7
CDY47811 Canola plasma membrane 39.12 24.63
CDY10508 Canola plasma membrane 39.75 24.59
CDY22357 Canola plasma membrane 38.81 24.43
CDY12693 Canola plasma membrane 38.03 24.23
CDY03757 Canola plasma membrane 40.53 12.68
CDY43003 Canola plasma membrane 40.38 12.3
CDY38804 Canola golgi, plasma membrane 12.21 12.21
CDY11604 Canola plasma membrane 11.74 11.74
CDY67675 Canola cytosol 0.16 0.78
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20GO:A0A078HEQ2UniProt:A0A078HEQ2
EnsemblPlants:CDY35283ProteinID:CDY35283ProteinID:CDY35283.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00058228001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin
PFAM:PF00069PFAM:PF11721PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EDDE5BSEG:seg::
Description
BnaC03g59400DBnaC03g59400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEQ2]
Coordinates
chrLK032349:+:206171..209628
Molecular Weight (calculated)
70683.5 Da
IEP (calculated)
7.315
GRAVY (calculated)
-0.238
Length
639 amino acids
Sequence
(BLAST)
001: MNPRNIPRDI TGLLPCAGPI SCTRNQRFLH INCGGDSIVT TNFSYKTKHE ADNNSTKAST NHHFKNWGIS NTGDFMDDDT NDDTYTISAT SMTPLGDSHG
101: LYKTARRSAL SLVYYAFCLE NGDYNVSLHF MEIQFSEEKP HSRLGRRIFD VYVQGKLFLR DFNIKEEANG TFKPVIKKLK AVVTDHMLEI RLYWAGKGTN
201: LIPSRGNYGP LISAISLCHS QEPRCGAEKI KHHIYPIIFG ATGALVTMIL LALGITRRRC RLDNNTRERD LRAQGLQTLC FTWRQLQAAT NDFDQANKLG
301: EGGFGCVFKG ELSDGTIIAV KQLSSKSCQG NREFVNEIGM ISGLNHPNLV KLYGCCVKKD QLLLVYEYME NNSLALALFG KSSTKLEWAM RQKICVGIAR
401: GLAFLHEGSV VRMVHRDIKT TNVLLDADLN AKISDFGLAR LHEEEHSHIS TKIAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKHKGSAD
501: HVSLINWALM LQQTGDIMDI VDPVLEGDFN SKEAVRMIKV ALVCTHSSPS LRPTMSEAVQ MLDGEIEVTQ VMSDPGLYGH NWSISKLRDA DTHASSSTSG
601: VTDQTASTMK SSVSGSDLYP SYPESVILNS TVELPSSSM
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.