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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67675 Canola cytosol 11.33 98.45
CDY35284 Canola plasma membrane 80.11 88.21
CDY72653 Canola cytosol 18.64 84.27
CDY35293 Canola cytosol 54.95 76.33
CDX94698 Canola plasma membrane 25.87 73.6
CDY43183 Canola mitochondrion, plasma membrane 57.72 73.52
CDX94703 Canola plasma membrane 55.93 72.4
CDX99848 Canola plasma membrane 65.57 72.13
AT1G29720.1 Thale cress plasma membrane 65.3 71.84
CDY35283 Canola cytosol, plasma membrane, plastid 40.86 71.67
CDX99849 Canola plasma membrane 64.41 71.56
CDY44292 Canola plasma membrane 62.53 70.95
CDY26317 Canola plasma membrane 63.78 70.58
CDY13695 Canola plasma membrane 64.14 70.35
CDY26319 Canola plasma membrane 63.51 70.08
CDY28419 Canola mitochondrion, plasma membrane 51.83 69.33
CDY49080 Canola cytosol 29.79 68.58
CDX94701 Canola cytosol 43.62 68.49
CDX67411 Canola plasma membrane 43.35 68.45
CDX94692 Canola plasma membrane 60.57 68.31
CDY43181 Canola cytosol 38.36 68.04
CDX73325 Canola plasma membrane 55.58 62.68
CDX77648 Canola cytosol 23.55 60.69
CDY67674 Canola cytosol 38.89 59.16
CDX98148 Canola plasma membrane 51.38 56.64
CDX98146 Canola plasma membrane 50.49 56.6
CDY43187 Canola plasma membrane 50.58 56.59
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 22.12 52.65
CDY43185 Canola plasma membrane 49.69 51.91
VIT_10s0003g01990.t01 Wine grape plasma membrane 41.84 51.09
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 25.51 48.81
CDX90205 Canola plasma membrane 74.4 47.52
CDX93632 Canola plasma membrane 40.95 45.36
CDX95138 Canola plasma membrane 40.86 45.26
CDX75790 Canola peroxisome 37.47 44.73
CDX90208 Canola plasma membrane 40.32 44.58
CDY35279 Canola plasma membrane 40.14 44.38
CDX81476 Canola cytosol 11.24 44.37
CDX82464 Canola plasma membrane 38.36 44.15
CDX97605 Canola plasma membrane 36.04 44.06
CDX75792 Canola plasma membrane 38.18 43.94
CDX99850 Canola plasma membrane 39.7 43.76
CDY26316 Canola plasma membrane 39.61 43.66
CDY60204 Canola plasma membrane 40.41 43.39
CDX75791 Canola plasma membrane 39.25 43.35
CDY20088 Canola plasma membrane 39.25 43.18
CDX82465 Canola plasma membrane 39.07 43.15
CDX98501 Canola plasma membrane 39.25 43.14
CDX82466 Canola plasma membrane 39.16 43.04
CDY25853 Canola plasma membrane 40.05 43.01
CDX98497 Canola cytosol, plasma membrane, plastid 37.11 42.89
CDY32338 Canola plasma membrane 39.25 42.76
CDX97606 Canola plasma membrane 38.89 42.75
CDX97610 Canola plasma membrane 38.27 37.93
CDX67736 Canola plasma membrane 32.56 36.35
CDY59119 Canola plasma membrane 32.56 36.35
CDX98288 Canola plasma membrane 32.47 36.26
CDY10509 Canola plasma membrane 32.92 35.93
CDY42407 Canola plasma membrane 32.92 35.72
CDY47811 Canola plasma membrane 32.29 35.66
CDY10508 Canola plasma membrane 32.56 35.33
CDY22357 Canola plasma membrane 31.94 35.27
CDY25239 Canola plasma membrane 28.9 35.06
CDY46490 Canola plasma membrane 31.67 34.94
CDY68250 Canola plasma membrane 31.49 34.74
CDY12693 Canola plasma membrane 29.35 32.8
CDY38804 Canola golgi, plasma membrane 17.13 30.05
CDY11604 Canola plasma membrane 16.95 29.73
CDX73324 Canola nucleus 0.8 29.03
CDY03757 Canola plasma membrane 32.47 17.82
CDY43003 Canola plasma membrane 32.65 17.45
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078HBZ3
UniProt:A0A078HBZ3EnsemblPlants:CDY35292ProteinID:CDY35292ProteinID:CDY35292.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00058238001InterPro:IPR000719InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF00069PFAM:PF11721ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI0004EE45CASEG:seg::::
Description
BnaC03g59310DBnaC03g59310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBZ3]
Coordinates
chrLK032349:+:240481..252297
Molecular Weight (calculated)
124397.0 Da
IEP (calculated)
7.588
GRAVY (calculated)
-0.028
Length
1121 amino acids
Sequence
(BLAST)
0001: MWVVFWALLL FFIIITSFFA TLTTSASPAL HADELHALGE ITTTLGIKRL NLSDGDPCFL KTLKLGGGVS NVVNMPVNNI VCDCSFNNNM TCHITEIFLK
0101: STSLPGKLPP ELAKLRYLQK IDLCRNYLSG SIPMEWASMP HLTFISLCAN NLSGPLPPGL QNFKNLTFLG VEANQFSGHI PDEFGNLTSL TGLELASNQF
0201: TGSLPSSLAR LVNLEIFRIS DNNFSGIIPE YIGNWSRLQR LDLQASGLKG PIPDAVARLE NLTNLIISDM TGINSFPNIS SQVIQNLILR NVSMSGPIPS
0301: YIWSKPVLRS LDLSFNKLTG EVLGINLVPK LTYLTGNMLS GEIKSGVYLN SKSNIDLSYN NFSWPSSCQE RSNINTYRSS YLKNILNGLL PCAGPVTCKR
0401: YKRSLHINCG GETVTVTNSI GKITYQADNS DQVKAATNQH FKNWGISNTG DFMDDNIDDD TYIISTSLTL PGDSPDLYKT ARRSALSLVY YAFCLENGEY
0501: NLKLHFMEIQ FSDQELYSRL GRRIFDVYVQ GKLFLRDFNI RQEANGTLKS IVKELKAVNV TDHKLEIWLY WAGKGTTLIP KRGNYGPLIS AISLCHTIIF
0601: LALGFYAHRK FRQDKKKRER DLRARGLQTV CFTWRQLQAA TNDFDEANKL GEGGFGSVFK GELPDGTIIA VKQLSSKSCQ GNREFVNEIG MISGLNHPNL
0701: VKLYGCCVEK DQLLLVYEYM ENNSLALVLS GKSSMKLDWK ARQKICVGIA RGLEFLHEGS MITMVHRDIK TPNVLLDADL NAKISDFGLA RLHEEEHTHI
0801: STKVAGTMGY MAPEYVLWGQ LTEKADVYSF GVVAMEIVSG KSNTKHKGTA DHISLLDWAL SLHQKGNILE VVDPVLEGHF NRKEAVRMIN VALVCTNSSP
0901: ALRPTMSEAV KMLEGVIELT QVSSDPGIYG DDWSLLKLRD IDDTHGSSST SVHALEEIAI TLGIKRVNLS YKDPCGSRSL MVIKQVDWNP EVNNTIACDC
1001: SFNNNMTCHI TELTLVNLTL VGKVPPELAK LRHLRSTNIT KVSYEFFSLT CSDLSANYLT GTIPPEWVSM PYLTFMLAPS LCLTLMLHLH DLRITLNILA
1101: AGSAGIVCLG IYQLGCKTSR I
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.