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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26317 Canola plasma membrane 95.94 95.56
CDY72653 Canola cytosol 20.42 83.06
CDY35293 Canola cytosol 61.45 76.83
CDY43183 Canola mitochondrion, plasma membrane 66.4 76.14
CDX94703 Canola plasma membrane 64.92 75.64
CDY35283 Canola cytosol, plasma membrane, plastid 47.57 75.12
CDY35284 Canola plasma membrane 74.33 73.67
CDX94698 Canola plasma membrane 28.74 73.6
CDY49080 Canola cytosol 35.38 73.31
CDX99848 Canola plasma membrane 73.14 72.42
CDX67411 Canola plasma membrane 50.74 72.11
AT1G29720.1 Thale cress plasma membrane 72.45 71.74
CDY26319 Canola plasma membrane 72.05 71.56
CDY28419 Canola mitochondrion, plasma membrane 59.07 71.12
CDY44292 Canola plasma membrane 69.38 70.85
CDY43181 Canola cytosol 44.1 70.41
CDX94701 Canola cytosol 49.55 70.03
CDY13695 Canola plasma membrane 70.86 69.96
CDX94692 Canola plasma membrane 67.79 68.81
CDY67675 Canola cytosol 8.62 67.44
CDY35292 Canola plasma membrane 71.56 64.41
CDX73325 Canola plasma membrane 61.25 62.17
CDX77648 Canola cytosol 26.07 60.46
CDY43187 Canola plasma membrane 55.5 55.89
CDX98148 Canola plasma membrane 56.29 55.85
CDX98146 Canola plasma membrane 55.2 55.7
CDY67674 Canola cytosol 40.44 55.36
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 24.58 52.65
CDY43185 Canola plasma membrane 54.61 51.35
VIT_10s0003g01990.t01 Wine grape plasma membrane 45.39 49.89
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 27.55 47.44
CDX93632 Canola plasma membrane 46.48 46.34
CDX95138 Canola plasma membrane 46.48 46.34
CDX75790 Canola peroxisome 41.92 45.05
CDY35279 Canola plasma membrane 45.19 44.97
CDX90208 Canola plasma membrane 45.09 44.87
CDX97605 Canola plasma membrane 40.63 44.71
CDX82464 Canola plasma membrane 42.62 44.15
CDX75792 Canola plasma membrane 42.52 44.05
CDX75791 Canola plasma membrane 44.1 43.84
CDY26316 Canola plasma membrane 44.1 43.76
CDX99850 Canola plasma membrane 44.1 43.76
CDX82465 Canola plasma membrane 43.9 43.65
CDX82466 Canola plasma membrane 44.1 43.63
CDX98501 Canola plasma membrane 43.71 43.24
CDX90205 Canola plasma membrane 75.12 43.19
CDY20088 Canola plasma membrane 43.41 42.98
CDX97606 Canola plasma membrane 43.41 42.94
CDY60204 Canola plasma membrane 44.4 42.91
CDX98497 Canola cytosol, plasma membrane, plastid 41.23 42.89
CDY32338 Canola plasma membrane 43.51 42.66
CDX81476 Canola cytosol 11.99 42.61
CDY25853 Canola plasma membrane 44.0 42.53
CDX73324 Canola nucleus 1.29 41.94
CDX97610 Canola plasma membrane 42.12 37.58
CDY59119 Canola plasma membrane 37.26 37.45
CDX67736 Canola plasma membrane 37.17 37.35
CDX98288 Canola plasma membrane 37.07 37.25
CDY42407 Canola plasma membrane 37.07 36.21
CDY10509 Canola plasma membrane 36.67 36.03
CDY46490 Canola plasma membrane 36.08 35.83
CDY25239 Canola plasma membrane 32.8 35.82
CDY10508 Canola plasma membrane 36.67 35.82
CDY47811 Canola plasma membrane 35.88 35.66
CDY68250 Canola plasma membrane 35.78 35.53
CDY22357 Canola plasma membrane 35.68 35.47
CDY12693 Canola plasma membrane 32.61 32.8
CDY38804 Canola golgi, plasma membrane 19.43 30.67
CDY11604 Canola plasma membrane 19.23 30.36
CDY03757 Canola plasma membrane 36.27 17.91
CDY43003 Canola plasma membrane 36.67 17.64
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078EGC2
EnsemblPlants:CDX99849ProteinID:CDX99849ProteinID:CDX99849.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00108566001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:MalectinPFAM:PF00069PFAM:PF11721PFAM:PF13855ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EB8895SEG:seg::::
Description
BnaC05g22710D
Coordinates
chrLK031914:-:571351..577210
Molecular Weight (calculated)
112579.0 Da
IEP (calculated)
6.763
GRAVY (calculated)
-0.154
Length
1009 amino acids
Sequence
(BLAST)
0001: MMWIVFSALL FFTIITSFSV IQTTSTSPAL HPDELNALEK IATALGIKRV NLSHEDPCSS GTLMITQQVD FVWNPEVNNT IACNCSFNNN TICHITELVL
0101: RNFTLEGKLP PDLAKLRYLQ SIDLSANYLT GTIPVEWASM SHLILISLSG NSLSGTLPTW LQNLKNLKFL GLEGNQFSGH IPDELGNLTN LERLYLSSNQ
0201: FTGSLPITLA KLVNLERFWI CDNNLSGTFP AYMGNWSQLK RLYLYASGLK GPIPDAVASL ENLTDLRISD TTGIDSFPIL SSKAIETLIL RNLNLSGPIP
0301: SYIWSWPNLR RLDLSFNKLT GEVQDIHKAP KFTYLAGNML TGNFESAFLF NSKPNIDLSY NNLTWSSSCH EKRNINTYRS SNWKNNLTGL LPCAGPITCK
0401: SYQRSLHINC GGGTVQITNS SRRITYQADN IEVLAATNLH MERWGISNTG DFTDDTSDDD TFIISTSLRT SGGSPDLYKT ARRSALSLVY YAFCLENGAY
0501: NVKLHFMEIQ FSDKEVYSRI GRRIFDVYVQ GELFLKDFNI KEEANGTLKP VVKELKAVNV TDHMLEIRLY WAGKGTTFIP NRGYYGPLIS AISLCHSHDP
0601: LCGAEKIKHH INYPLVLGAT GAFVTTTLLA LGIYAWRRRR EDKITRERDL RSESLQTVCY TWKQLKAATN NFDQANKLGE GGFGAVFKGE LPDGTIIAVK
0701: QLSSKSHQGN REFVNEIGMI SGLNHPNLVK LYGCCVEKNQ LLLVYEYMQN NSLALVLHEK SSLKLDWVAR KKICVGIAKG LEFLHEGSMI RMVHRDIKTS
0801: NVLLDADLNA KISDFGLARL HEEEHTHIST KVAGTMGYMA PEYVLWGQLT EKVDVYSFGV VVVEIVSGQS NTKHKGSDDD QVSLINWALT LQQKGDILEI
0901: VDPMLEGDFN SKEAVRMINV ALVCTNSSPS MRPTMSEAVQ MLEGVIEIKE VMPDSGLYGH DWSMSKLMHI DTRGRSSTSG VTDQTETSMK SSVSGFDLYQ
1001: YPSSSLECP
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.