CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90208	Canola	plasma membrane	96.75	96.75
AT1G29750.2	Thale cress	plasma membrane	82.54	81.98
CDX99850	Canola	plasma membrane	82.15	81.91
CDY26316	Canola	plasma membrane	81.76	81.51
CDY72653	Canola	cytosol	14.99	61.29
KRH59039	Soybean	plasma membrane	54.14	55.79
VIT_10s0003g01880.t01	Wine grape	cytosol	52.86	55.72
PGSC0003DMT400073238	Potato	cytosol, nucleus, plasma membrane	40.93	53.76
Solyc02g071880.2.1	Tomato	plasma membrane	52.56	53.57
KRH21191	Soybean	plasma membrane	52.66	52.56
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	29.59	51.19
CDX77648	Canola	cytosol	21.89	51.03
CDX94698	Canola	plasma membrane	19.53	50.25
CDY49080	Canola	cytosol	23.96	49.9
CDX75790	Canola	peroxisome	45.66	49.31
CDX97605	Canola	plasma membrane	44.48	49.18
CDY20088	Canola	plasma membrane	48.13	47.89
CDX82466	Canola	plasma membrane	48.03	47.75
CDX98497	Canola	cytosol, plasma membrane, plastid	45.56	47.63
CDX75791	Canola	plasma membrane	47.63	47.59
CDY32338	Canola	plasma membrane	48.22	47.52
CDY43183	Canola	mitochondrion, plasma membrane	41.22	47.5
CDX97606	Canola	plasma membrane	47.73	47.45
CDX98501	Canola	plasma membrane	47.73	47.45
CDX82464	Canola	plasma membrane	45.56	47.43
CDX75792	Canola	plasma membrane	45.36	47.23
CDY35283	Canola	cytosol, plasma membrane, plastid	29.68	47.1
CDX82465	Canola	plasma membrane	46.94	46.9
CDY43181	Canola	cytosol	29.19	46.84
CDX94703	Canola	plasma membrane	39.94	46.77
CDY28419	Canola	mitochondrion, plasma membrane	38.07	46.06
CDY13695	Canola	plasma membrane	45.76	45.4
CDY44292	Canola	plasma membrane	44.08	45.24
CDX98146	Canola	plasma membrane	44.58	45.2
CDX99849	Canola	plasma membrane	44.97	45.19
CDY26317	Canola	plasma membrane	45.07	45.11
CDY43187	Canola	plasma membrane	44.58	45.11
CDX94701	Canola	cytosol	31.76	45.1
CDY35284	Canola	plasma membrane	45.17	44.99
CDX67411	Canola	plasma membrane	31.46	44.93
CDX95138	Canola	plasma membrane	44.77	44.86
CDX99848	Canola	plasma membrane	45.07	44.85
CDX93632	Canola	plasma membrane	44.67	44.76
CDY35293	Canola	cytosol	35.5	44.61
CDX94692	Canola	plasma membrane	43.69	44.57
CDX98148	Canola	plasma membrane	44.18	44.05
CDY26319	Canola	plasma membrane	43.79	43.7
CDY60204	Canola	plasma membrane	44.97	43.68
CDY25853	Canola	plasma membrane	44.87	43.58
CDX81476	Canola	cytosol	11.83	42.25
CDX73325	Canola	plasma membrane	41.42	42.25
CDX97610	Canola	plasma membrane	46.94	42.09
CDY43185	Canola	plasma membrane	43.59	41.19
CDY35292	Canola	plasma membrane	44.38	40.14
CDY59119	Canola	plasma membrane	36.88	37.25
CDX67736	Canola	plasma membrane	36.78	37.15
CDX98288	Canola	plasma membrane	36.69	37.05
CDY67674	Canola	cytosol	26.82	36.91
CDY10509	Canola	plasma membrane	37.28	36.81
CDY22357	Canola	plasma membrane	36.49	36.45
CDY47811	Canola	plasma membrane	36.49	36.45
CDY10508	Canola	plasma membrane	36.69	36.01
CDY42407	Canola	plasma membrane	36.69	36.01
CDY25239	Canola	plasma membrane	32.74	35.93
CDY46490	Canola	plasma membrane	35.8	35.73
CDY67675	Canola	cytosol	4.54	35.66
CDY68250	Canola	plasma membrane	35.6	35.53
CDY12693	Canola	plasma membrane	32.05	32.4
CDY38804	Canola	golgi, plasma membrane	19.92	31.61
CDY11604	Canola	plasma membrane	19.72	31.3
CDX90205	Canola	plasma membrane	44.97	25.98
CDY03757	Canola	plasma membrane	36.69	18.21
CDY43003	Canola	plasma membrane	36.39	17.59
CDX73324	Canola	nucleus	0.49	16.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078HCT5
UniProt:A0A078HCT5	EnsemblPlants:CDY35279	ProteinID:CDY35279	ProteinID:CDY35279.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00058221001	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Malectin
PFAM:PF07714	PFAM:PF11721	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27006	PANTHER:PTHR27006:SF55	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EE594F
SEG:seg	:	:	:	:	:

Description

BnaC03g59440DBnaC03g59440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCT5]

Coordinates

chrLK032349:+:145437..158676

Molecular Weight (calculated)

112560.0 Da

IEP (calculated)

6.620

GRAVY (calculated)

-0.192

Length

1014 amino acids

Sequence
(BLAST)

0001: MFADKKKKKK DINIFVFSVF AIICFKSFSI NAIKLPQDEV DALQQIATTL GSKYWKFDAE SCTVEKVGLT ETPPPSAEQV IECECSPTNE TDCHVVKIAF
0101: KDHNLPGTLP PEITKLPKLR EIDFALNYLN GTIPLEWFTT NLTIISLLVN RLSGEIPKEL GNLTSLTFLN LESNAFSGTI PQELGNLVNL GTLMLSSNNL
0201: TGNLPASLSK LQNMTDFRIN DLQLNGTIPS YIQNWKELQR LEIVASGLTG PIPSAISVLN NLKNLRVSDI GGPVQPFPYL RNSTEISKLV LKNCNLAGQI
0301: PDYLSNFKNL ETLDLSFNKL PGTIPSFAHA EKLRFLILAG NRLEGDVPTE LLRDGITVDL SYNNLKWQSS ESRSCRPNMN LNLNLFQSTS TKESSKVLPC
0401: IDDFKCPRYS SCLHVNCGGS DLTLKQNKTK ILYQGDGEAE GGAAKYYLKR NDYWGFSSTG DYMDDNNFQN TRFTVFVPTS NLSDLYKSAR IAPVSLTYFH
0501: ACLENGKYTV NLDFAEIRFT NDETYNRLGR RVFDIYIQEK LVLKDFNIMD EAKGAQKPIT KPFTVNVTNH FLAIRLSWAG KGTTRIPTRG VYGPLISAIS
0601: IVSDSKPCAS PGSGMSLGAK IAIGLGSICL IIFILGVLWF FGCLPKCWQQ RKDPNEEELP SGTFTLRQIK FATDDFNPAN KIGEGGFGAV FKGVLSDGRV
0701: VAVKQLSSKS RQGNREFLNE IGAISCLQHP NLVKLHGFCV ERSQLLLVYE YMENNSLAQA LFSPKHKQIP LDWPTRFKIC CGIAKGLAFL HEESPLKFVH
0801: RDIKATNILL DKDLTPKISD FGLARLDEEE HTHVSTKVAG TIGYMAPEYA LWGYLSFKAD VYSYGVLVLE IVAGINNSSF MAAGDEVCLL EWAMECEDSG
0901: DLMQVVDERL RPEVDKKEAE TLIKVALVCT SASASDRPIM SEVVGMLEGH YPVPEPTPGA SRKSGDIRFK AFKDVRKGME ENSSKTQFSL NSYPSSSSDT
1001: YVAGQERKQD ESVP

Best Arabidopsis Sequence Match ( AT1G29750.2 )
(BLAST)

0001: MISLYQILAE KKKKKKNDLN IFAFSVFAII CFKFYSVNAI KLPQQEVDAL QQIATTLGSK FWKFDAENCK IEMVGLTETP PPTAKQEIEC ECSPTNDTDC
0101: HVVKFAFKDH NLPGTLPQIV KLPYLREIDL AYNYINGTLP REWASSNLTF ISLLVNRLSG EIPKEFGNSS LTYLDLESNA FSGTIPQELG NLVHLKKLLL
0201: SSNKLTGTLP ASLARLQNMT DFRINDLQLS GTIPSYIQNW KQLERLEMIA SGLTGPIPSV ISVLSNLVNL RISDIRGPVQ PFPSLKNVTG LTKIILKNCN
0301: ISGQIPTYLS HLKELETLDL SFNKLVGGIP SFAQAENLRF IILAGNMLEG DAPDELLRDG ITVDLSYNNL KWQSPESRAC RPNMNLNLNL FQSTSTKKSS
0401: KFLPCIKDFK CPRYSSCLHV NCGGSDMYVK EKKTKELYEG DGNVEGGAAK YFLKPDANWG FSSTGDFMDD NNFQNTRFTM FVPASNQSDL YKSARIAPVS
0501: LTYFHACLEN GNYTINLDFA EIRFTNDENY NRLGRRLFDI YIQEKLVAKD FNIMDEAKGA QTPIIKPLTA YVTNHFLTIR LSWAGKGTTR IPTRGVYGPI
0601: ISAISIVSDS KPCERPKTGM SPGAYIAIGI GAPCLIIFIL GFLWICGCLP RCGRQRKDPY EEELPSGTFT LRQIKFATDD FNPTNKIGEG GFGAVFKGVL
0701: ADGRVVAVKQ LSSKSRQGNR EFLNEIGAIS CLQHPNLVKL HGFCVERAQL LLAYEYMENN SLSSALFSPK HKQIPMDWPT RFKICCGIAK GLAFLHEESP
0801: LKFVHRDIKA TNILLDKDLT PKISDFGLAR LDEEEKTHIS TKVAGTIGYM APEYALWGYL TFKADVYSFG VLVLEIVAGI TNSNFMGAGD SVCLLEFANE
0901: CVESGHLMQV VDERLRPEVD RKEAEAVIKV ALVCSSASPT DRPLMSEVVA MLEGLYPVPE STPGVSRNAG DIRFKAFKDL RRGMENNSKT QCSVKSYPSS
1001: SSTSSGAGQA VQERKKEESR P

Arabidopsis Description

RKF1Probable LRR receptor-like serine/threonine-protein kinase RFK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXF2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.