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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44292 Canola plasma membrane 87.42 87.96
CDY72653 Canola cytosol 21.43 85.89
CDX94698 Canola plasma membrane 31.69 79.95
CDX73324 Canola nucleus 2.41 77.42
CDY35283 Canola cytosol, plasma membrane, plastid 47.89 74.49
CDY43181 Canola cytosol 46.08 72.47
CDY43183 Canola mitochondrion, plasma membrane 63.78 72.05
CDY13695 Canola plasma membrane 73.64 71.62
CDX99848 Canola plasma membrane 73.34 71.54
CDX94703 Canola plasma membrane 61.87 71.02
CDX94701 Canola cytosol 50.7 70.59
CDY26319 Canola plasma membrane 71.33 69.78
CDY35293 Canola cytosol 56.44 69.52
AT1G29720.1 Thale cress plasma membrane 71.13 69.38
CDY28419 Canola mitochondrion, plasma membrane 58.45 69.33
CDY35284 Canola plasma membrane 70.12 68.47
CDX99849 Canola plasma membrane 68.81 67.79
CDY49080 Canola cytosol 33.1 67.56
CDY26317 Canola plasma membrane 68.31 67.03
CDX67411 Canola plasma membrane 46.68 65.35
CDY35292 Canola plasma membrane 68.31 60.57
CDX73325 Canola plasma membrane 59.46 59.46
CDX77648 Canola cytosol 25.96 59.31
CDX98146 Canola plasma membrane 55.43 55.1
CDY67675 Canola cytosol 7.14 55.04
CDY43187 Canola plasma membrane 55.43 54.99
CDX98148 Canola plasma membrane 56.14 54.87
CDY67674 Canola cytosol 39.13 52.78
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 24.85 52.44
CDY43185 Canola plasma membrane 53.92 49.95
VIT_10s0003g01990.t01 Wine grape plasma membrane 45.98 49.78
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 28.57 48.46
CDX93632 Canola plasma membrane 45.57 44.76
CDX75790 Canola peroxisome 42.25 44.73
CDX95138 Canola plasma membrane 45.47 44.66
CDX90208 Canola plasma membrane 44.77 43.89
CDY35279 Canola plasma membrane 44.57 43.69
CDX97605 Canola plasma membrane 40.14 43.51
CDX81476 Canola cytosol 12.37 43.31
CDX75792 Canola plasma membrane 42.35 43.22
CDX82464 Canola plasma membrane 42.35 43.22
CDX98497 Canola cytosol, plasma membrane, plastid 42.15 43.2
CDX99850 Canola plasma membrane 43.96 42.97
CDX75791 Canola plasma membrane 43.86 42.96
CDX98501 Canola plasma membrane 44.06 42.94
CDX82466 Canola plasma membrane 44.06 42.94
CDY20088 Canola plasma membrane 43.96 42.89
CDX82465 Canola plasma membrane 43.76 42.86
CDX97606 Canola plasma membrane 43.86 42.75
CDY26316 Canola plasma membrane 43.66 42.67
CDY32338 Canola plasma membrane 43.86 42.37
CDY25853 Canola plasma membrane 43.86 41.76
CDY60204 Canola plasma membrane 43.76 41.67
CDX90205 Canola plasma membrane 70.12 39.72
CDX97610 Canola plasma membrane 42.56 37.4
CDX67736 Canola plasma membrane 35.31 34.96
CDX98288 Canola plasma membrane 35.21 34.86
CDY59119 Canola plasma membrane 35.21 34.86
CDY10509 Canola plasma membrane 35.11 33.98
CDY42407 Canola plasma membrane 35.21 33.88
CDY68250 Canola plasma membrane 34.51 33.76
CDY46490 Canola plasma membrane 34.51 33.76
CDY47811 Canola plasma membrane 34.41 33.69
CDY10508 Canola plasma membrane 35.01 33.69
CDY22357 Canola plasma membrane 34.21 33.5
CDY25239 Canola plasma membrane 30.99 33.33
CDY12693 Canola plasma membrane 31.69 31.41
CDY38804 Canola golgi, plasma membrane 17.81 27.7
CDY11604 Canola plasma membrane 17.71 27.54
CDY03757 Canola plasma membrane 34.81 16.94
CDY43003 Canola plasma membrane 35.21 16.68
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078E0M6
EnsemblPlants:CDX94692ProteinID:CDX94692ProteinID:CDX94692.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00158044001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:MalectinPFAM:PF07714PFAM:PF11721PFAM:PF13855ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EF06BCSEG:seg:::
Description
BnaC07g09660D
Coordinates
chrLK031883:-:1166114..1172998
Molecular Weight (calculated)
109827.0 Da
IEP (calculated)
6.669
GRAVY (calculated)
-0.123
Length
994 amino acids
Sequence
(BLAST)
001: MSTVFSVLLL FFTITISFFA ISTTTYVSSD LHPDELNVLE KIATTLGVKG LNLYEDPCKL KTLKIDQKIG DPEIKNTIFC DVCFNNTCHI TNIVLKALSL
101: PGKLPPELAN LRYLQSIDLC RNYLSGTIPM EWASLPNLTS ISLCANNFSG TLPTGLQNFK NLTFLSLEAN QFFGTIPDEL GNLTNLNGLH LGSNQFNGSL
201: PSTLARLVNL TDFRVSDNNF QGTIPEYIGK WSQLKTLHLY ASGLKGPMPK EVALLEKLTD LRISDTTGIN AVPILSSKDI IKTLILRKVG LSGSIPPYIW
301: NLKKLKTLDL SFNRLTGEVH GELNGVNAPK YTFLTGNRLS GNVESSGLFN SDSNFDLSYN NFSWSSTCHE QRTGLLPCAG PINCTDYQGF LHINCGGGNI
401: SITNSSYETT YEADNNVTTA ATNQHFKNWG ISNTGEFTDD DQENDNYFFS TPSRDSSELY KTARRSALSL VYYAFCLKNG TYNVKLHFME TQFSDDEPFS
501: RLGRRVFDVF VQGELFLKDF NIKKEAKGTL KPFVKEKKVN VTNHMLEIRL YWAGKGTTLI PSRGNYGPLI SAISLCHQIV SFSSGHTSLS SSYIGSCHLM
601: IHFQNFQKKS LIINGFSLER DHIALRAHGL QTVCFTWKQL QAATKNFDEA NKLGEGGFGS VFKGELSDGT IIAVKQLSAK SCQGNREFVN EIGMISGLSH
701: PNLVKLYGCC VEKIQLLLVY EYMENNSLAL ALSGKSNSLK LDWAARQNIC IGIAKGLEFL HEGSMIRMVH RDIKSTNVLL DSDLNAKISD FGLARLHEEE
801: HTHISTKIAG TIGYMAPEYA LWGQLTEKAD VYSFGVVAME IVSGKSNTKQ KGTVDHVSLI NWALTLQQTG DIMEIVDPTL EGDFNIKEAV RMIKVAFVCT
901: NSSPSLRPAM SEAVQMLQGE IEITQVMSDP SLYDHNLSIS KLRGSDIHGS SSTSGLTDQT TTTMKSSVSS CDLYPLYPES MILNSTVEFS SSSV
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.