CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43181	Canola	cytosol	84.31	95.25
CDY72653	Canola	cytosol	29.97	86.29
CDX94698	Canola	plasma membrane	46.36	84.01
CDY35283	Canola	cytosol, plasma membrane, plastid	67.65	75.59
CDX73324	Canola	nucleus	3.22	74.19
CDY49080	Canola	cytosol	50.14	73.51
CDX67411	Canola	plasma membrane	68.91	69.3
CDY28419	Canola	mitochondrion, plasma membrane	72.69	61.93
CDY35293	Canola	cytosol	69.19	61.21
CDX77648	Canola	cytosol	36.55	60.0
CDX94703	Canola	plasma membrane	71.57	59.01
CDY43183	Canola	mitochondrion, plasma membrane	71.29	57.84
CDY44292	Canola	plasma membrane	75.91	54.86
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	36.13	54.78
CDY67674	Canola	cytosol	56.3	54.55
CDX99848	Canola	plasma membrane	76.05	53.29
CDY13695	Canola	plasma membrane	75.07	52.45
CDY35284	Canola	plasma membrane	74.23	52.06
CDY26319	Canola	plasma membrane	73.67	51.77
AT1G29720.1	Thale cress	plasma membrane	73.53	51.52
CDX94692	Canola	plasma membrane	70.59	50.7
CDX99849	Canola	plasma membrane	70.03	49.55
CDY26317	Canola	plasma membrane	69.89	49.26
CDX73325	Canola	plasma membrane	68.07	48.89
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	39.22	47.78
CDX81476	Canola	cytosol	17.37	43.66
CDY35292	Canola	plasma membrane	68.49	43.62
CDX98146	Canola	plasma membrane	54.9	39.2
CDX98148	Canola	plasma membrane	55.32	38.84
CDY43187	Canola	plasma membrane	54.48	38.82
VIT_10s0003g01990.t01	Wine grape	plasma membrane	49.02	38.13
CDY67675	Canola	cytosol	6.86	37.98
CDY43185	Canola	plasma membrane	53.5	35.6
CDX97605	Canola	plasma membrane	44.4	34.57
CDX75790	Canola	peroxisome	44.26	33.65
CDX93632	Canola	plasma membrane	46.36	32.71
CDX95138	Canola	plasma membrane	46.22	32.61
CDX98497	Canola	cytosol, plasma membrane, plastid	43.7	32.16
CDY35279	Canola	plasma membrane	45.1	31.76
CDY20088	Canola	plasma membrane	45.24	31.7
CDX82464	Canola	plasma membrane	43.14	31.62
CDY26316	Canola	plasma membrane	44.96	31.56
CDX97606	Canola	plasma membrane	44.96	31.47
CDX99850	Canola	plasma membrane	44.82	31.47
CDX82465	Canola	plasma membrane	44.68	31.43
CDX75792	Canola	plasma membrane	42.86	31.42
CDX98501	Canola	plasma membrane	44.82	31.37
CDX90208	Canola	plasma membrane	44.54	31.36
CDY60204	Canola	plasma membrane	45.8	31.32
CDY32338	Canola	plasma membrane	45.1	31.29
CDX82466	Canola	plasma membrane	44.68	31.27
CDX75791	Canola	plasma membrane	44.26	31.13
CDY25853	Canola	plasma membrane	45.38	31.03
CDX90205	Canola	plasma membrane	73.39	29.86
CDX97610	Canola	plasma membrane	43.7	27.59
CDY25239	Canola	plasma membrane	34.87	26.95
CDY42407	Canola	plasma membrane	38.1	26.33
CDY10509	Canola	plasma membrane	37.82	26.29
CDX67736	Canola	plasma membrane	36.83	26.2
CDY59119	Canola	plasma membrane	36.83	26.2
CDX98288	Canola	plasma membrane	36.83	26.2
CDY47811	Canola	plasma membrane	37.11	26.11
CDY22357	Canola	plasma membrane	37.11	26.11
CDY10508	Canola	plasma membrane	37.53	25.94
CDY46490	Canola	plasma membrane	36.69	25.79
CDY68250	Canola	plasma membrane	36.41	25.59
CDY12693	Canola	plasma membrane	34.45	24.53
CDY38804	Canola	golgi, plasma membrane	13.73	15.34
CDY11604	Canola	plasma membrane	13.17	14.71
CDY03757	Canola	plasma membrane	37.82	13.22
CDY43003	Canola	plasma membrane	38.1	12.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:A0A078DZV5	EnsemblPlants:CDX94701
ProteinID:CDX94701	ProteinID:CDX94701.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00158070001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF55	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EEB291	SEG:seg

Description

BnaC07g09570D

Coordinates

chrLK031883:-:1369918..1388680

Molecular Weight (calculated)

79404.4 Da

IEP (calculated)

7.217

GRAVY (calculated)

-0.314

Length

714 amino acids

Sequence
(BLAST)

001: MHRREKKANI IDVSFNKLSG EVDLQGKVPK YTYLNDNMLS GNVGSGAFLN NESYIDLSYN NFSYPSSCPD KSININSYRS SYLQKNLTGL LPCASPIKCN
101: YQRSLHINCG GDKVVITNSS HKITYQADNN ETKAATNQHF ENWGVSSTGY LSNDIYIITP TFALPENSPA FYKSARQSAQ SLVYYAFCLE NGAYNVKLHF
201: MEIQFSNEEP YSRLGRRIFD IYLQGELFKR DFNIKEEANG TRKPILKEAN VNVANHFLEI RLYWAGKGTT LIPQRGNYGP IISAISLCHS SLGPGCGAEK
301: TIHRTNYPLI FGTTGALLAV MLLALGLYAQ KRCRGDKNTR ERDLRAQGLQ TVCFTWRQLQ AATNNFDEAK KLGEGGFGSV FKGELSDGTI IAVKQLSAKS
401: CQGNREFVNE IGMISGLNHP NLVKRYGCCV EKNQLLLVYE YMENNSLALA LALNGESTPN LDWAARQRIC VGIARGLEFL HEGSMIRMVH RDIKTTNVLL
501: DADLNAKISD FGLARLHEEE HTHISTKIAG TIGYMAPEYA LYGELTEKAD VFSFGVVAME IVSGKSNTKQ KGSADHVWLI KWARKLQQTG DIMDIIDPVL
601: EGDFNRKEAE RMIKVSLVCT NSSPLLRPTM SEVVQMLEGE IEITQVLSDP GLYEHNFSIS KPRGTDTHGS SSTSGLTDQT ETTMKSSVSS TDLYPLYPES
701: MILNSTVDFS SSAF

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.