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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72653 Canola cytosol 26.27 85.48
CDY35283 Canola cytosol, plasma membrane, plastid 61.83 78.09
CDX94698 Canola plasma membrane 37.79 77.41
CDX73324 Canola nucleus 2.85 74.19
CDY49080 Canola cytosol 44.36 73.51
CDY43181 Canola cytosol 57.25 73.1
CDX94703 Canola plasma membrane 75.34 70.21
CDY28419 Canola mitochondrion, plasma membrane 72.24 69.57
CDX67411 Canola plasma membrane 61.09 69.44
CDX94701 Canola cytosol 61.21 69.19
CDY43183 Canola mitochondrion, plasma membrane 74.85 68.64
CDY35284 Canola plasma membrane 81.66 64.73
CDX99849 Canola plasma membrane 76.83 61.45
CDY26317 Canola plasma membrane 76.83 61.2
CDX77648 Canola cytosol 32.71 60.69
AT1G29720.1 Thale cress plasma membrane 76.46 60.55
CDX99848 Canola plasma membrane 73.23 58.0
CDY26319 Canola plasma membrane 72.99 57.97
CDY44292 Canola plasma membrane 70.63 57.69
CDY13695 Canola plasma membrane 72.12 56.95
CDX94692 Canola plasma membrane 69.52 56.44
CDY67674 Canola cytosol 51.18 56.04
CDY35292 Canola plasma membrane 76.33 54.95
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 31.97 54.78
CDX73325 Canola plasma membrane 66.17 53.72
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 35.07 48.29
CDX98146 Canola plasma membrane 55.39 44.7
CDY43187 Canola plasma membrane 54.89 44.21
CDX98148 Canola plasma membrane 55.51 44.05
CDX81476 Canola cytosol 15.37 43.66
VIT_10s0003g01990.t01 Wine grape plasma membrane 48.33 42.48
CDY43185 Canola plasma membrane 54.52 41.01
CDX90205 Canola plasma membrane 86.37 39.72
CDX97605 Canola plasma membrane 44.49 39.15
CDX75790 Canola peroxisome 44.61 38.34
CDX95138 Canola plasma membrane 46.47 37.06
CDX93632 Canola plasma membrane 46.47 37.06
CDX98497 Canola cytosol, plasma membrane, plastid 44.36 36.91
CDY67675 Canola cytosol 5.82 36.43
CDY20088 Canola plasma membrane 45.11 35.72
CDX97606 Canola plasma membrane 45.11 35.69
CDX82464 Canola plasma membrane 43.0 35.63
CDX98501 Canola plasma membrane 44.98 35.59
CDY35279 Canola plasma membrane 44.61 35.5
CDX90208 Canola plasma membrane 44.61 35.5
CDX82466 Canola plasma membrane 44.86 35.49
CDX82465 Canola plasma membrane 44.61 35.47
CDX75792 Canola plasma membrane 42.75 35.42
CDY32338 Canola plasma membrane 45.11 35.37
CDX75791 Canola plasma membrane 44.36 35.27
CDX99850 Canola plasma membrane 43.87 34.81
CDY26316 Canola plasma membrane 43.87 34.81
CDY60204 Canola plasma membrane 44.49 34.39
CDY25853 Canola plasma membrane 44.36 34.29
CDX97610 Canola plasma membrane 44.49 31.74
CDY59119 Canola plasma membrane 38.29 30.78
CDX67736 Canola plasma membrane 38.17 30.68
CDX98288 Canola plasma membrane 38.17 30.68
CDY42407 Canola plasma membrane 38.54 30.11
CDY10509 Canola plasma membrane 38.17 29.99
CDY10508 Canola plasma membrane 38.17 29.82
CDY47811 Canola plasma membrane 37.3 29.66
CDY46490 Canola plasma membrane 37.3 29.63
CDY25239 Canola plasma membrane 33.83 29.55
CDY68250 Canola plasma membrane 37.17 29.53
CDY22357 Canola plasma membrane 36.93 29.36
CDY12693 Canola plasma membrane 34.08 27.42
CDY38804 Canola golgi, plasma membrane 16.36 20.66
CDY11604 Canola plasma membrane 15.86 20.03
CDY03757 Canola plasma membrane 37.42 14.78
CDY43003 Canola plasma membrane 38.04 14.63
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078HER7
UniProt:A0A078HER7EnsemblPlants:CDY35293ProteinID:CDY35293ProteinID:CDY35293.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00058239001InterPro:IPR000719InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF00069PFAM:PF11721ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EED3CF
SEG:seg:::::
Description
BnaC03g59300DBnaC03g59300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HER7]
Coordinates
chrLK032349:+:252474..259482
Molecular Weight (calculated)
89218.2 Da
IEP (calculated)
8.531
GRAVY (calculated)
-0.203
Length
807 amino acids
Sequence
(BLAST)
001: MFNCGKTSTE GPISGGSDAY QKVACALGLN NVGLGVEGNQ FSGTIPDELG NLTKLVKLHL ASSRFTGSLP ITLARQVNLE RLWISDNKFS GTIPAYIGKW
101: SRLRKLILRN VGLSGPIPSY IWNLPNLTRL DLSFNKLTGE VQDIQKAPKL THTYLTGNML SGNVESAFLI NNKPNITGLL PCAGPVNCKT YQRSIHINCG
201: GEDIKIKNSF GKITYQADNS KTMAVTNHHQ ENWGISNTGD FTDDVSDDDT FIISTSLRLS KDSPHLYKTA RRSALSLVYY AFCLENGAYN VKLHFMEIQF
301: SEKEVYSRIG RRIFDVYVQG KLFLRDFNIK EEANGPLKPV VKELKVNVTD HLLEIRLYWA GKGTTLIPSR GNYGPLISAI SLCHSLEPRC GAERIKHHIS
401: YPLILGATGS LVTITLLAVG IYARRRRLKY NNTRKRDLRA HGLQTVCFTW RQLQAATNNF DQANKLGEGG FGSVFKGELS DGTIIAVKQL SSKSCQGNRE
501: FVNEIGMISG LNHPNLVKLY GCCVEKNQLL LVYEYMENNS LALVLSGKSS MKLDWKARQK ICVGIARGLE FLHEGSMITM VHRDIKTPNV LLDADLNAKI
601: SDFGLARIHE EEHTHISTKV AGTMGYMAPE YVLWGQLTEK ADVYSFGVVA MEIVSGKSNT KHKGTADHIS LLDWALSLHQ KGNILEVVDP ILEGHFDKKE
701: AVRMINVALV CTNSSPALRP TMSEAVKMLE GVIELTQVSS DPGIYGDDWS LLKLRDIDDT HGSSSTSGVT DQTRTTTKSS VSGCDLYPLY PESMTLNSTV
801: EYHSSSL
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.