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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72653 Canola cytosol 27.27 81.05
CDY49080 Canola cytosol 46.54 70.43
CDX94698 Canola plasma membrane 37.18 69.54
CDY35283 Canola cytosol, plasma membrane, plastid 56.04 64.63
CDY43181 Canola cytosol 54.27 63.29
CDX77648 Canola cytosol 35.55 60.23
CDX67411 Canola plasma membrane 54.82 56.9
CDX94701 Canola cytosol 54.55 56.3
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 33.38 52.23
CDY35293 Canola cytosol 56.04 51.18
CDY28419 Canola mitochondrion, plasma membrane 54.95 48.33
CDX94703 Canola plasma membrane 56.04 47.69
CDY43183 Canola mitochondrion, plasma membrane 56.31 47.16
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 36.09 45.39
CDY35284 Canola plasma membrane 62.14 44.99
AT1G29720.1 Thale cress plasma membrane 57.53 41.61
CDY44292 Canola plasma membrane 55.5 41.4
CDX81476 Canola cytosol 15.6 40.49
CDX99849 Canola plasma membrane 55.36 40.44
CDX99848 Canola plasma membrane 55.77 40.33
CDY13695 Canola plasma membrane 55.9 40.31
CDY26319 Canola plasma membrane 55.5 40.26
CDY26317 Canola plasma membrane 55.09 40.08
CDX94692 Canola plasma membrane 52.78 39.13
CDY35292 Canola plasma membrane 59.16 38.89
CDX73325 Canola plasma membrane 52.1 38.63
VIT_10s0003g01990.t01 Wine grape plasma membrane 42.74 34.31
CDX98148 Canola plasma membrane 46.95 34.02
CDX98146 Canola plasma membrane 45.86 33.8
CDY43187 Canola plasma membrane 45.73 33.63
CDY43185 Canola plasma membrane 45.73 31.41
CDX97605 Canola plasma membrane 36.77 29.55
CDX75790 Canola peroxisome 35.82 28.11
CDX98497 Canola cytosol, plasma membrane, plastid 36.09 27.42
CDX93632 Canola plasma membrane 37.58 27.37
CDX95138 Canola plasma membrane 37.31 27.17
CDY35279 Canola plasma membrane 36.91 26.82
CDX90208 Canola plasma membrane 36.77 26.73
CDX98501 Canola plasma membrane 36.63 26.47
CDX82464 Canola plasma membrane 34.74 26.28
CDX75792 Canola plasma membrane 34.74 26.28
CDY26316 Canola plasma membrane 36.09 26.16
CDX99850 Canola plasma membrane 36.09 26.16
CDX82466 Canola plasma membrane 36.09 26.08
CDX97606 Canola plasma membrane 35.96 25.98
CDX75791 Canola plasma membrane 35.69 25.91
CDX73324 Canola nucleus 1.09 25.81
CDY20088 Canola plasma membrane 35.55 25.71
CDX82465 Canola plasma membrane 35.28 25.62
CDY32338 Canola plasma membrane 35.41 25.36
CDY60204 Canola plasma membrane 35.82 25.29
CDY25853 Canola plasma membrane 35.69 25.19
CDY25239 Canola plasma membrane 29.72 23.7
CDX90205 Canola plasma membrane 55.9 23.48
CDY59119 Canola plasma membrane 31.89 23.41
CDX98288 Canola plasma membrane 31.75 23.31
CDX67736 Canola plasma membrane 31.75 23.31
CDX97610 Canola plasma membrane 35.28 22.99
CDY42407 Canola plasma membrane 32.16 22.94
CDY10509 Canola plasma membrane 31.89 22.88
CDY22357 Canola plasma membrane 31.48 22.86
CDY10508 Canola plasma membrane 31.89 22.75
CDY46490 Canola plasma membrane 30.66 22.24
CDY47811 Canola plasma membrane 30.53 22.17
CDY12693 Canola plasma membrane 30.12 22.13
CDY68250 Canola plasma membrane 30.39 22.05
CDY03757 Canola plasma membrane 32.56 11.75
CDY43003 Canola plasma membrane 32.7 11.49
CDY38804 Canola golgi, plasma membrane 9.5 10.95
CDY11604 Canola plasma membrane 9.09 10.49
CDY67675 Canola cytosol 0.54 3.1
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078JLI3UniProt:A0A078JLI3
EnsemblPlants:CDY67674ProteinID:CDY67674ProteinID:CDY67674.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00065974001
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF00069
PFAM:PF11721PIRSF:PIRSF000641ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55
InterPro:Prot_kinase_domSMART:SM00220InterPro:SRK-like_kinaseSUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI0004EE68E5SEG:seg:::
Description
BnaCnng55900DBnaCnng55900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLI3]
Coordinates
chrLK036382:-:329..8024
Molecular Weight (calculated)
82078.2 Da
IEP (calculated)
7.209
GRAVY (calculated)
-0.149
Length
737 amino acids
Sequence
(BLAST)
001: MPKYYDPFNW GISNTGDFMD DGDENDTYIM STNITLPGNS SDLYMTARKS ALSLVYYAFC LENGEYNLKL HFMEIQFSDQ ELYSRLGRRI FDVYVQGKLF
101: LRDFNIRQEA NGTLKSIVKE LKAVNVTDHK LEIWLYWAGK GTTLIPKRGN YGPLISAISL CHSLEQHCGV EKTKHHINYP LIFGVTGPLV AIIFLALGFY
201: AHRKCRQIKK KRERDLRAQG LQTVCFTWRQ LQAATNNYDQ SNKLGEGGFG SVFKRELSDG TIIAVKQLSS KSCQGNREFV NEIGMISGLN HPNLVKLYGC
301: CVEKDQLLLV YEYMENNSLA LALSGRSSLK LDWSARKKIC VGLARGLEFL HEGAAIRMIH RDIKTPNVLL DADLNAKISD FGLARLHEEE HTHISTKVAG
401: TILFSSSGDA LMGHLTEKAD VYSFGVVAME IVSGKSNTTQ KGSDDNAPLI KWAMTLQQKG DIMEIVDPKL EGEFNSLEAE RMIKVALVCT NATPSLRPLM
501: SEAVKMLEGE MEIPQIMSGP AVYGHDLNFS KLMEMQESTS IGVEGNQFSG TIPDELGNLT KLVKLDLASN QFTGSLPITL DRLVNLEQLW ISDNKFSGTI
601: PAYIGKWSRL RKLFLHASGL KGPFPDAGAC LENLIDLRIS DTTGINSFPV LSSKVIETLI LRNVGLSGPI PSYIWNLPNL TRLDLSFNKL TGEVQDIQKA
701: PKLTYTYLTG NMLSGNVESA FLINNKPNMY VSPACMA
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.