Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94698 | Canola | plasma membrane | 51.61 | 4.06 |
| CDY28419 | Canola | mitochondrion, plasma membrane | 100.0 | 3.7 |
| CDY35283 | Canola | cytosol, plasma membrane, plastid | 70.97 | 3.44 |
| CDY43181 | Canola | cytosol | 67.74 | 3.32 |
| CDX94701 | Canola | cytosol | 74.19 | 3.22 |
| CDY35293 | Canola | cytosol | 74.19 | 2.85 |
| CDY26319 | Canola | plasma membrane | 87.1 | 2.66 |
| CDX99848 | Canola | plasma membrane | 87.1 | 2.65 |
| CDX94692 | Canola | plasma membrane | 77.42 | 2.41 |
| CDY35284 | Canola | plasma membrane | 74.19 | 2.26 |
| CDX67411 | Canola | plasma membrane | 51.61 | 2.25 |
| CDX94703 | Canola | plasma membrane | 54.84 | 1.96 |
| CDY13695 | Canola | plasma membrane | 64.52 | 1.96 |
| CDY43183 | Canola | mitochondrion, plasma membrane | 54.84 | 1.93 |
| CDY44292 | Canola | plasma membrane | 41.94 | 1.32 |
| CDX90205 | Canola | plasma membrane | 74.19 | 1.31 |
| CDX99849 | Canola | plasma membrane | 41.94 | 1.29 |
| CDY26317 | Canola | plasma membrane | 41.94 | 1.28 |
| CDY67674 | Canola | cytosol | 25.81 | 1.09 |
| CDX81476 | Canola | cytosol | 9.68 | 1.06 |
| CDX98146 | Canola | plasma membrane | 32.26 | 1.0 |
| CDY43187 | Canola | plasma membrane | 32.26 | 1.0 |
| CDX98148 | Canola | plasma membrane | 32.26 | 0.98 |
| CDX97605 | Canola | plasma membrane | 29.03 | 0.98 |
| CDX98497 | Canola | cytosol, plasma membrane, plastid | 29.03 | 0.93 |
| CDY20088 | Canola | plasma membrane | 29.03 | 0.88 |
| CDX98501 | Canola | plasma membrane | 29.03 | 0.88 |
| CDX97606 | Canola | plasma membrane | 29.03 | 0.88 |
| CDY32338 | Canola | plasma membrane | 29.03 | 0.87 |
| CDX75790 | Canola | peroxisome | 25.81 | 0.85 |
| CDY35292 | Canola | plasma membrane | 29.03 | 0.8 |
| CDX82465 | Canola | plasma membrane | 25.81 | 0.79 |
| CDX75791 | Canola | plasma membrane | 25.81 | 0.79 |
| CDX82466 | Canola | plasma membrane | 25.81 | 0.78 |
| CDY60204 | Canola | plasma membrane | 22.58 | 0.67 |
| CDY25853 | Canola | plasma membrane | 22.58 | 0.67 |
| CDY10508 | Canola | plasma membrane | 19.35 | 0.58 |
| CDX97610 | Canola | plasma membrane | 19.35 | 0.53 |
| CDY35279 | Canola | plasma membrane | 16.13 | 0.49 |
| CDY68250 | Canola | plasma membrane | 16.13 | 0.49 |
| CDY46490 | Canola | plasma membrane | 16.13 | 0.49 |
| CDX99850 | Canola | plasma membrane | 16.13 | 0.49 |
| CDY26316 | Canola | plasma membrane | 16.13 | 0.49 |
| CDY10509 | Canola | plasma membrane | 16.13 | 0.49 |
| CDY42407 | Canola | plasma membrane | 16.13 | 0.48 |
| CDX95138 | Canola | plasma membrane | 12.9 | 0.4 |
| CDX93632 | Canola | plasma membrane | 12.9 | 0.4 |
| CDX90208 | Canola | plasma membrane | 12.9 | 0.39 |
| CDY22357 | Canola | plasma membrane | 12.9 | 0.39 |
| CDY47811 | Canola | plasma membrane | 12.9 | 0.39 |
| CDY12693 | Canola | plasma membrane | 9.68 | 0.3 |
| CDY43185 | Canola | plasma membrane | 9.68 | 0.28 |
| CDY43003 | Canola | plasma membrane | 16.13 | 0.24 |
| CDY49080 | Canola | cytosol | 3.23 | 0.21 |
| CDY03757 | Canola | plasma membrane | 12.9 | 0.2 |
| CDY25239 | Canola | plasma membrane | 3.23 | 0.11 |
| CDX82464 | Canola | plasma membrane | 3.23 | 0.1 |
| CDY59119 | Canola | plasma membrane | 3.23 | 0.1 |
| CDX98288 | Canola | plasma membrane | 3.23 | 0.1 |
| CDX67736 | Canola | plasma membrane | 3.23 | 0.1 |
| CDY67675 | Canola | cytosol | 0.0 | 0.0 |
| CDY72653 | Canola | cytosol | 0.0 | 0.0 |
| CDY38804 | Canola | golgi, plasma membrane | 0.0 | 0.0 |
| CDY11604 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX77648 | Canola | cytosol | 0.0 | 0.0 |
| CDX75792 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX73325 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX73324 | EnsemblPlantsGene:GSBRNA2T00106443001 | ProteinID:CDX73324 | ProteinID:CDX73324.1 | SEG:seg | UniParc:UPI0004EE8E9B |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC05g27820D
Coordinates
chrLK031798:-:1684088..1684183
Molecular Weight (calculated)
3312.8 Da
IEP (calculated)
3.699
GRAVY (calculated)
-0.126
Length
31 amino acids
Sequence
(BLAST)
(BLAST)
1: MKSDASGCDL YPLYPESMIL NSTSDLSSSS L
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.