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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010817.1-P Field mustard plasma membrane 41.2 95.38
CDY67675 Canola cytosol 6.61 89.92
CDY35284 Canola plasma membrane 51.74 89.19
CDY35293 Canola cytosol 39.72 86.37
CDY72653 Canola cytosol 12.02 85.08
CDY35283 Canola cytosol, plasma membrane, plastid 28.43 78.09
CDX94698 Canola plasma membrane 17.44 77.67
CDY43183 Canola mitochondrion, plasma membrane 38.01 75.8
CDX94703 Canola plasma membrane 37.15 75.29
AT1G29720.1 Thale cress plasma membrane 43.7 75.27
CDX99849 Canola plasma membrane 43.19 75.12
CDX99848 Canola plasma membrane 43.42 74.78
CDY35292 Canola plasma membrane 47.52 74.4
CDY26317 Canola plasma membrane 42.91 74.33
CDX73324 Canola nucleus 1.31 74.19
CDY43181 Canola cytosol 26.44 73.42
CDX94701 Canola cytosol 29.86 73.39
CDY13695 Canola plasma membrane 42.73 73.39
CDY26319 Canola plasma membrane 42.45 73.33
CDY28419 Canola mitochondrion, plasma membrane 34.93 73.15
CDY44292 Canola plasma membrane 41.03 72.87
CDY49080 Canola cytosol 20.17 72.69
CDX67411 Canola plasma membrane 29.06 71.83
CDX94692 Canola plasma membrane 39.72 70.12
CDX73325 Canola plasma membrane 35.95 63.48
CDX77648 Canola cytosol 15.21 61.38
CDY43187 Canola plasma membrane 33.11 57.98
CDX98146 Canola plasma membrane 32.88 57.7
CDX98148 Canola plasma membrane 33.39 57.62
CDY67674 Canola cytosol 23.48 55.9
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 14.47 53.93
CDY43185 Canola plasma membrane 32.31 52.84
VIT_10s0003g01990.t01 Wine grape plasma membrane 26.55 50.76
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 16.07 48.12
CDX75790 Canola peroxisome 24.73 46.22
CDX97605 Canola plasma membrane 23.99 45.91
CDX95138 Canola plasma membrane 26.38 45.75
CDX93632 Canola plasma membrane 26.38 45.75
CDY35279 Canola plasma membrane 25.98 44.97
CDX98497 Canola cytosol, plasma membrane, plastid 24.84 44.95
CDX90208 Canola plasma membrane 25.93 44.87
CDY20088 Canola plasma membrane 26.04 44.85
CDX82465 Canola plasma membrane 25.93 44.83
CDX75791 Canola plasma membrane 25.93 44.83
CDX98501 Canola plasma membrane 25.93 44.61
CDX82464 Canola plasma membrane 24.67 44.46
CDX82466 Canola plasma membrane 25.81 44.41
CDX81476 Canola cytosol 7.18 44.37
CDX97606 Canola plasma membrane 25.75 44.31
CDY32338 Canola plasma membrane 25.93 44.22
CDX99850 Canola plasma membrane 25.58 44.15
CDY26316 Canola plasma membrane 25.53 44.05
CDX75792 Canola plasma membrane 24.44 44.05
CDY25853 Canola plasma membrane 25.47 42.82
CDY60204 Canola plasma membrane 25.47 42.82
CDX97610 Canola plasma membrane 25.19 39.08
CDX67736 Canola plasma membrane 21.42 37.45
CDX98288 Canola plasma membrane 21.37 37.35
CDY59119 Canola plasma membrane 21.37 37.35
CDY42407 Canola plasma membrane 21.82 37.08
CDY10508 Canola plasma membrane 21.65 36.79
CDY10509 Canola plasma membrane 21.48 36.71
CDY47811 Canola plasma membrane 20.97 36.26
CDY22357 Canola plasma membrane 20.85 36.06
CDY46490 Canola plasma membrane 20.85 36.02
CDY68250 Canola plasma membrane 20.68 35.73
CDY25239 Canola plasma membrane 18.8 35.71
CDY12693 Canola plasma membrane 18.97 33.2
CDY38804 Canola golgi, plasma membrane 11.28 30.99
CDY11604 Canola plasma membrane 11.05 30.36
CDY03757 Canola plasma membrane 21.2 18.21
CDY43003 Canola plasma membrane 21.37 17.87
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078DLY7
EnsemblPlants:CDX90205ProteinID:CDX90205ProteinID:CDX90205.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00150762001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:MalectinPFAM:PF00069PFAM:PF11721ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EE02BDSEG:seg:::
Description
BnaA08g17790D
Coordinates
chrLK031862:-:638231..652748
Molecular Weight (calculated)
194661.0 Da
IEP (calculated)
7.781
GRAVY (calculated)
-0.159
Length
1755 amino acids
Sequence
(BLAST)
0001: MGVVFSAFVL FFTIITSFFS TLTTSASPAL HPDELKALGE IATTLGIKRL NLSDGDPCLL KTLKLDVVSS PNSDMENIIL CDCSFNNNMT CHIIELKLKS
0101: ISLSGKLPPE LAKLKYLQNI VFCRNYLSGS IPMEWASLPN LTSISLCANR LSGPLPPGLQ NFKSLTFLGV EANQFSGPIP DELGNLTNLK RLDLVSNQFT
0201: GSLPSSLARL VNLETFRISD NNFTGIIPEY ISNWSQLQRL DLQASGLKGP FPDAVARLEN LTYLFISDMT GINSFPNISS QVIKDLVLRN VSMSGKIPSY
0301: IWSKPNLRSL DLSFNKLTGE VLGINPVPKF TYLTGNMLSG EIKSGVYLNS RSNIDLSYNN FSLPSSCQER SNINTYRSSS LKNTLTGLLP CAGPITCKHY
0401: RRSLHINCGG ETVTVTNSIG KITYQADNID QVKAATNQHF KNWGISNTGD FMDDNIDDDT YIVSTSLTLP GDSPDLYKTA RRSALSLVYY AFCLENGEYN
0501: LKLHFMEIQF SDKELYSRLG RRIFDVYVQG KLFLRDFNIR QEANGTLKPV VKELKDVNVT DHKLEIWLYW AGKGTTLIPK RGNYGPLISA ISLCHSLEQH
0601: CGVEKTKHHI NYPLIFGVTG PLVAIIFLAL GFYAHRKYRQ DKKKRERDLR AQGLQTVCFT WRQLQAATNN FDEANKLGEG GFGSVFKGEL SDGTIIAVKK
0701: LSSKSCQGNR EFVNEIGMIS GLNHPNLVKL YGCCVEKDQL LLVYEYMENN SLALALSGRS SLKLDWAARK KICVGIARGL EFLHEGAAMR MIHRDIKTPN
0801: VLLDANLNAK ISDFGLARLH EEEHTHISTK VAGTIGYMAP EYALMGHLTE KADVYSFGVV AMEIVSGKSN TTQKGSDDNA PLIKWAMTLQ QKGDIMEIVD
0901: PKLEGEFNSL EAERMTRVAL VCTNATPSLR PLMSEAVKML EGEMEIPRIM SGPAVYGHDL NFSKLMEMQE STSMSGYGLF LHASGLKGPF PDAVACLENL
1001: IDLRISDTTG INSFPILSSK VIETLILRNV GLSGPIPSYI WNLPNLTRLD LSFNKLTGEI QDIQKAPKLN YLTGNMLSGN VESAFLINNK PNIDLSYNNF
1101: SWSSSCQEKS NINTYRSSIL KNNLTGLLPC AGPVNCKTYQ RSVHINCGGE DLKITNSFGK ITYQADNSKT NAATNHHQQN WGISNTGDFT DDAYVDDTFI
1201: ISTSLRLSKD SPYLYKTARR SALSLVYYAF CLENGAYNVK LHFMEIQFSE KEVYSRIGRR IFDVYVQGKL FLRDFNIKEE ANGTLKPVVK ELKANVTDHL
1301: LEIRLYWAGK GTALIPNRGN YGPLISAISL CHSLEPQCGA EKIKHHISFP LILGATGVLV TITLLAVGIY ARRRCLKDSN TIKRDLRAEG LQTVCFTWRQ
1401: LQDATNNFDK ANKLGEGGFG SVFKGELPDG TIIAVKQLSS KSCQGNREFV NEIGMISGLN HPNLVKLYGC CVEKNHLMLV YEYMENNSLA LVLSGKSSMK
1501: LDWKTRQKIC VGIARGLEFL HEGSMIRMVH RDIKTPNVLL DADLNAKISD FGLARLHEEE HTHISTKVAG TMGYMAPEYV LWGQLTEKAD VYSFGVVAME
1601: IVSGKSNTKH KGTADHLSLL DWALSLHQKG NILEVVDPVL EGHFNRKEAV RMINVALVCT NSSPALRPTM SEAMKMLEGV IELTQVSSDP GIYGDDWSLL
1701: KLRDIDDTHG SSSTSGVTDQ TRTTTKSSVS GCDLYPLYPE SMTLNSTVEY HSSSL
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.