CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72653	Canola	cytosol	41.89	82.26
CDX94698	Canola	plasma membrane	56.06	69.29
CDX67411	Canola	plasma membrane	95.48	65.49
CDY35283	Canola	cytosol, plasma membrane, plastid	76.18	58.06
CDY43181	Canola	cytosol	73.92	56.96
CDX77648	Canola	cytosol	46.2	51.72
CDX94701	Canola	cytosol	73.51	50.14
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	46.0	47.56
CDY67674	Canola	cytosol	70.43	46.54
CDY35293	Canola	cytosol	73.51	44.36
CDY28419	Canola	mitochondrion, plasma membrane	75.77	44.03
CDX81476	Canola	cytosol	24.44	41.9
CDX94703	Canola	plasma membrane	73.1	41.11
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	49.28	40.96
CDY43183	Canola	mitochondrion, plasma membrane	73.31	40.57
CDY44292	Canola	plasma membrane	73.31	36.13
AT1G29720.1	Thale cress	plasma membrane	75.36	36.02
CDY26319	Canola	plasma membrane	74.74	35.83
CDY13695	Canola	plasma membrane	75.15	35.81
CDX99848	Canola	plasma membrane	74.33	35.52
CDX99849	Canola	plasma membrane	73.31	35.38
CDY35284	Canola	plasma membrane	73.1	34.97
CDY26317	Canola	plasma membrane	72.28	34.75
CDX73325	Canola	plasma membrane	70.64	34.61
CDX94692	Canola	plasma membrane	67.56	33.1
VIT_10s0003g01990.t01	Wine grape	plasma membrane	57.91	30.72
CDY35292	Canola	plasma membrane	68.58	29.79
CDY43187	Canola	plasma membrane	55.65	27.05
CDX98148	Canola	plasma membrane	56.47	27.04
CDX98146	Canola	plasma membrane	55.24	26.9
CDX97605	Canola	plasma membrane	49.28	26.17
CDX75790	Canola	peroxisome	49.28	25.56
CDX93632	Canola	plasma membrane	51.95	25.0
CDX95138	Canola	plasma membrane	51.75	24.9
CDY43185	Canola	plasma membrane	54.62	24.79
CDX98497	Canola	cytosol, plasma membrane, plastid	48.67	24.43
CDY35279	Canola	plasma membrane	49.9	23.96
CDX90208	Canola	plasma membrane	49.49	23.77
CDX75792	Canola	plasma membrane	47.43	23.72
CDX82464	Canola	plasma membrane	47.23	23.61
CDX82466	Canola	plasma membrane	49.28	23.53
CDX98501	Canola	plasma membrane	49.08	23.43
CDY20088	Canola	plasma membrane	48.87	23.36
CDX82465	Canola	plasma membrane	48.67	23.35
CDX75791	Canola	plasma membrane	48.67	23.35
CDX97606	Canola	plasma membrane	48.87	23.33
CDY60204	Canola	plasma membrane	49.49	23.08
CDY26316	Canola	plasma membrane	47.84	22.91
CDY25853	Canola	plasma membrane	49.08	22.89
CDY32338	Canola	plasma membrane	48.25	22.84
CDX99850	Canola	plasma membrane	47.64	22.81
CDY25239	Canola	plasma membrane	40.45	21.32
CDX67736	Canola	plasma membrane	42.51	20.62
CDX98288	Canola	plasma membrane	42.51	20.62
CDY59119	Canola	plasma membrane	42.51	20.62
CDX97610	Canola	plasma membrane	47.64	20.51
CDY46490	Canola	plasma membrane	42.51	20.37
CDY68250	Canola	plasma membrane	42.09	20.18
CDX90205	Canola	plasma membrane	72.69	20.17
CDY47811	Canola	plasma membrane	41.89	20.1
CDY22357	Canola	plasma membrane	41.68	20.0
CDY42407	Canola	plasma membrane	42.09	19.85
CDY12693	Canola	plasma membrane	40.66	19.74
CDY10509	Canola	plasma membrane	41.48	19.67
CDY10508	Canola	plasma membrane	41.68	19.65
CDY03757	Canola	plasma membrane	41.68	9.94
CDY43003	Canola	plasma membrane	41.68	9.68
CDY38804	Canola	golgi, plasma membrane	7.8	5.95
CDY11604	Canola	plasma membrane	7.19	5.48
CDX73324	Canola	nucleus	0.21	3.23
CDY67675	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:3.30.200.20	GO:A0A078IE21	UniProt:A0A078IE21	EnsemblPlants:CDY49080
ProteinID:CDY49080	ProteinID:CDY49080.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00092306001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin
PFAM:PF07714	PFAM:PF11721	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF54	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EEBE5A	SEG:seg	:

Description

BnaC06g12380DBnaC06g12380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IE21]

Coordinates

chrLK032809:-:75425..83918

Molecular Weight (calculated)

54263.7 Da

IEP (calculated)

8.280

GRAVY (calculated)

-0.157

Length

487 amino acids

Sequence
(BLAST)

001: MEIQFTEELY ISLGRRIFDV YIQVKHHNIL RKMFLRDFNI KEEANGTMKP IVQELKDVNV TNHVLEIRLY WAGKGTTLIP NRGYYGPLIS AISLCHSQER
101: RCGVEKTKHH TNYPMISGAI GGLVAILLLA LGIYAARKRY IEDKSTKERA QGLQTNCFTW RQLQAATNNF DQANKLGEGG FGSVFKGELS NGTIIAVKQL
201: SSESSQGNRE FVNEIGMISG LNHPNLVKLY GCCVEKNQLL LVYEYMEKNS LALALFGKSS HKLNWSTRQK ICVGIARGLE FLHHGSTIKM VHRDIKTTNV
301: LLDTDFNAKI SDFGLARLHD EEHSHISTKI AGTIGYMAPE YALRGQLTEK ADVYSFGIVA MEIVSGRSTV KKKGSAADVP LINWALTLEK RGDIMEVIDP
401: ILEGDFQSEE AVRMIKVALL CTNSTLSLRP TMAEVVQMLE GDLKITSVMP DHGLYGHNLS ISKLMDIDTT THGSSSTTTG TTDFILK

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.