Factsheet for GSMUA_Achr4P15520_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G056600.2	Barley	cytosol	11.85	76.74
Zm00001d020172_P001	Maize	cytosol, plasma membrane, plastid	71.81	71.81
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	55.3	52.56
TraesCS5A01G186500.1	Wheat	plasma membrane	73.07	40.26
TraesCS5D01G191800.1	Wheat	plasma membrane	73.07	40.18
TraesCS5B01G184900.1	Wheat	plasma membrane	72.17	39.68
HORVU5Hr1G056670.6	Barley	plasma membrane	72.17	39.61
KXG35455	Sorghum	plasma membrane	71.99	38.82
KXG35457	Sorghum	plasma membrane	69.48	37.54
VIT_12s0028g01350.t01	Wine grape	plasma membrane	68.04	37.49
KRH73704	Soybean	plasma membrane	65.53	35.61
Bra018693.1-P	Field mustard	plasma membrane	63.91	35.6
CDX93632	Canola	plasma membrane	63.91	35.18
KRH14451	Soybean	plasma membrane	64.81	35.15
AT1G07650.2	Thale cress	plasma membrane	64.27	35.1
CDX95138	Canola	plasma membrane	63.73	35.08
PGSC0003DMT400044535	Potato	plasma membrane	63.91	34.66
Solyc07g055810.2.1	Tomato	plasma membrane	63.55	34.47
GSMUA_Achr6P25940_001	Banana	plasma membrane	58.35	33.3
GSMUA_Achr1P04980_001	Banana	plasma membrane	55.48	30.72
Os09t0345300-01	Rice	plasma membrane	27.83	21.95
GSMUA_Achr8P07040_001	Banana	plasma membrane	39.14	20.3
GSMUA_Achr7P16620_001	Banana	cytosol, plasma membrane, plastid	17.06	14.98
GSMUA_Achr2P17280_001	Banana	plasma membrane	16.7	14.86
GSMUA_Achr2P17300_001	Banana	plasma membrane	16.88	13.64
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	6.64	6.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G15520_001	EnsemblPlants:GSMUA_Achr4P15520_001	EnsemblPlants:GSMUA_Achr4T15520_001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SP67	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0002959E59	SEG:seg	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Source:GMGC_GENE;Acc:GSMUA_Achr4G15520_001]

Coordinates

chr4:-:11717873..11728203

Molecular Weight (calculated)

61947.1 Da

IEP (calculated)

6.454

GRAVY (calculated)

-0.154

Length

557 amino acids

Sequence
(BLAST)

001: MDNDVDADNY IASNISELFM PNSELYTRAR LSPLSLTYYG LCMMEGSYMV KLHFAETVFT HDNTFRSLGK RLFNVFIQEE LVLEDFNIED AAGESGEPII
101: KTFNASVTDH TLKIQFYWAG RGTTGIPSRG VYGPLISAVS VTPNFTPPPD VESSSDKRMH IIISLGVSIL VVFLVLLALG IWRKRRRNSM HQELRGLDLQ
201: TGSFTLRQIK AATKNFDPAN KIGEGGFGSV YKGLLSDGTV IAVKQLSSRS KQGNREFINE IGMISALQHP NLVKLYGCCT EGNQLLLIYE YMENNCLARA
301: LFGKDARHKL KLDWPTRHKI CLGIARGLAY LHEESRLRIV HRDIKASNVL LDRDLDAKIS DFGLAKLSEE DCSHISTRIA GTIGYMAPEY AMRGYLTDKA
401: DVYSFGVVAL EIVSGKSNTN YRPKDEFVYL LDWACVLHER GTLLELVDPD LGSVYSEEEA KLMLNVALLC TNSSPSLRPT MSKVVSLLEG RASLQPFLSN
501: VSTSTNSLSS KRAGRNFWQN LSGSRSQSAH ASGEDYSELD PEDDVSLQLL VDAVRIS

Best Arabidopsis Sequence Match ( AT1G07650.4 )
(BLAST)

001: MRISDNNFTG PIPDFISNWT RILKLQMHGC GLDGPIPSSI SSLTSLTDLR ISDLGGKPSS FPPLKNLESI KTLILRKCKI IGPIPKYIGD LKKLKTLDLS
101: FNLLSGEIPS SFENMKKADF IYLTGNKLTG GVPNYFVERN KNVDVSFNNF TDESSIPSHD CNRVTSNLVE SFALGNKSHK GSTCFLQRMP CVHPKRYHLY
201: KLYINCGGGE VKVDKEITYQ ADDEPKGASM YVLGANKRWA LSSTGNFMDN DDDADEYTVQ NTSRLSVNAS SPSFGLYRTA RVSPLSLTYY GICLGNGNYT
301: VNLHFAEIIF TDDNTLYSLG KRLFDIYVQD QLVIKNFNIQ EAARGSGKPI IKSFLVNVTD HTLKIGLRWA GKGTTGIPIR GVYGPMISAI SVEPNFKPPV
401: YYDTKDIILK VGVPVAAATL LLFIIVGVFW KKRRDKNDID KELRGLDLQT GTFTLRQIKA ATDNFDVTRK IGEGGFGSVY KGELSEGKLI AVKQLSAKSR
501: QGNREFVNEI GMISALQHPN LVKLYGCCVE GNQLILVYEY LENNCLSRAL FGKDESSRLK LDWSTRKKIF LGIAKGLTFL HEESRIKIVH RDIKASNVLL
601: DKDLNAKISD FGLAKLNDDG NTHISTRIAG TIGYMAPEYA MRGYLTEKAD VYSFGVVALE IVSGKSNTNF RPTEDFVYLL DWAYVLQERG SLLELVDPTL
701: ASDYSEEEAM LMLNVALMCT NASPTLRPTM SQVVSLIEGK TAMQELLSDP SFSTVNPKLK ALRNHFWQNE LSRSLSFSTS GPRTASANSL VDAEEKTGLL
801: D

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.