CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
plasma membrane 3
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55301	Soybean	cytosol, plasma membrane, vacuole	49.33	80.44
KRH75938	Soybean	cytosol	40.84	53.44
VIT_19s0014g00530.t01	Wine grape	plasma membrane	34.1	51.32
KRH21897	Soybean	cytosol, plasma membrane	48.25	49.38
KRH75931	Soybean	cytosol	41.51	48.89
KRH21906	Soybean	endoplasmic reticulum	63.88	47.45
KRH27395	Soybean	cytosol, plasma membrane	54.45	45.09
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	35.44	44.88
VIT_19s0014g00470.t01	Wine grape	plasma membrane	59.84	44.09
CDX97605	Canola	plasma membrane	54.31	43.95
VIT_19s0014g00520.t01	Wine grape	plasma membrane	59.16	43.42
VIT_19s0014g00500.t01	Wine grape	plasma membrane	59.7	43.26
Bra027306.1-P	Field mustard	plasma membrane	50.67	42.11
KRH27397	Soybean	plasma membrane	56.87	42.03
CDX75790	Canola	peroxisome	53.1	41.96
KRH75939	Soybean	plasma membrane	54.18	40.28
CDX98497	Canola	cytosol, plasma membrane, plastid	52.56	40.21
Bra001566.1-P	Field mustard	plasma membrane	53.23	40.1
Bra027307.1-P	Field mustard	plasma membrane	54.31	39.86
KRH21905	Soybean	plasma membrane	54.99	39.38
CDX97606	Canola	plasma membrane	54.04	39.31
CDX98501	Canola	plasma membrane	53.5	38.92
CDX82466	Canola	plasma membrane	53.23	38.73
CDY20088	Canola	plasma membrane	52.83	38.47
AT1G53420.1	Thale cress	plasma membrane	49.33	38.41
CDY32338	Canola	plasma membrane	53.23	38.39
Bra021579.1-P	Field mustard	plasma membrane	52.7	38.37
AT3G14840.2	Thale cress	plasma membrane	52.56	38.24
CDX82465	Canola	plasma membrane	51.21	37.44
Bra001567.1-P	Field mustard	plasma membrane	51.08	37.34
CDX75791	Canola	plasma membrane	51.08	37.34
CDX82464	Canola	plasma membrane	48.92	37.27
CDX75792	Canola	plasma membrane	48.65	37.06
KRH26159	Soybean	plasma membrane	49.87	36.6
KRH55049	Soybean	endoplasmic reticulum	49.87	36.56
KRH27392	Soybean	plasma membrane	48.52	35.79
KRH27378	Soybean	plasma membrane	48.25	35.55
KRH21908	Soybean	plasma membrane	48.52	35.19
CDX97610	Canola	plasma membrane	52.97	34.75
KRH14451	Soybean	plasma membrane	47.84	34.57
KRH73704	Soybean	plasma membrane	47.57	34.44
KRH21191	Soybean	plasma membrane	44.88	32.78
KRH59039	Soybean	plasma membrane	41.78	31.5
KRH37939	Soybean	plasma membrane	40.43	29.24
KRH44862	Soybean	plasma membrane	40.03	28.72
KRH44860	Soybean	plasma membrane	39.76	28.5
KRH75936	Soybean	extracellular	0.13	1.22

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	EMBL:ACUP02003945	EnsemblPlantsGene:GLYMA_06G243800
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	UniProt:K7KX43	EnsemblPlants:KRH55298
ProteinID:KRH55298	ProteinID:KRH55298.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Malectin	PFAM:PF07714
PFAM:PF11721	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF11	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0002959C00	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:40562483..40571513

Molecular Weight (calculated)

82371.5 Da

IEP (calculated)

7.976

GRAVY (calculated)

-0.037

Length

742 amino acids

Sequence
(BLAST)

001: MHAKVFLIYD SSLSANPLTG LIPGKVANIS PLQSLTLEFN QLSGNLPPEL GNLPNLQSFN VLKDVILSSV SKNARMIQGT ELSGPIPFGI SLQESLTDLY
101: RISDLNGSDF FHFPTLNNMT NLEILILRSC NINGQYQNIL GLYLVYKPCN FCYSSNNMLN CKIMMFLELS FNKLSGQIPS SFEYGLRKTD YIYLTGNLLT
201: RPIPAWTEKE KNVIISCLKS VACPKVSYSL HINCGGKQIK VNGNETYDDD TDTAGPARFH LGGKKWGFSS TGHFMDNVRA EYSIWLNQSK LCIADVELYM
301: DARGNMVLKD FNIAEEVGGV NNAVTKSFTI VISSNTLEIR LYWAGKETIG IPFKSVYGHL ISAISVNSPR ITIKQTSILP SENGSSMSAD SVAAIVAGVV
401: VFLVLVFGIL WRRGCLGQKS FLAKEIKGLK LQMGIFTLRQ IKAATNNFNK ANKIGEGGFG PVYKGNLSDG TIIAVKQLSS KSRQGNREFL NELGMISALQ
501: HPCLVKLYGF CVEGDQLLLV YEYIENNSLA RALFGPAEYH IKLDWPTRQK ICVGIARGLT YLHEESRLKI VHRGTSRPLM ISDFGLAKLD EEDNTHISTR
601: IAGTYGYMAP EYAMHGYLTD KADVYSFGVV ALEIVSGRSN MIQRQKEEAF HLLDWVTARI NVSLLCTNVT ASLRPTMSLV VSMLEGRSVV QEVFSESSEA
701: LDEKKLEAMR QHSMDDTLAA SSSATDLYPV NMNFSYWEKR GW

Best Arabidopsis Sequence Match ( AT1G07650.1 )
(BLAST)

0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.