Factsheet for Bra028415.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	76.88	75.05
CDX67411	Canola	plasma membrane	99.8	69.3
Bra030166.1-P	Field mustard	plasma membrane	76.27	51.86
Bra032331.1-P	Field mustard	cytosol	71.2	49.58
Bra010817.1-P	Field mustard	plasma membrane	74.64	48.55
Bra010816.1-P	Field mustard	plasma membrane	75.25	47.99
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	45.84	47.98
Bra030161.1-P	Field mustard	plasma membrane	68.76	47.48
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	74.44	43.64
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	49.7	41.81
Bra030167.1-P	Field mustard	plasma membrane	76.06	38.5
Bra032332.1-P	Field mustard	plasma membrane	73.83	38.16
Bra030169.1-P	Field mustard	plastid	49.29	37.85
AT1G29720.1	Thale cress	plasma membrane	77.69	37.59
VIT_10s0003g01990.t01	Wine grape	plasma membrane	56.8	30.5
Bra007908.1-P	Field mustard	cytosol	42.8	30.23
Bra030170.1-P	Field mustard	plasma membrane	46.86	30.16
Bra032333.1-P	Field mustard	plasma membrane	48.28	29.27
Bra030174.1-P	Field mustard	plasma membrane	56.39	29.08
Bra027306.1-P	Field mustard	plasma membrane	47.67	26.32
Bra001566.1-P	Field mustard	plasma membrane	51.12	25.58
Bra018693.1-P	Field mustard	plasma membrane	51.52	25.4
Bra027307.1-P	Field mustard	plasma membrane	50.71	24.73
Bra001567.1-P	Field mustard	plasma membrane	50.3	24.43
Bra021579.1-P	Field mustard	plasma membrane	50.3	24.34
Bra038124.1-P	Field mustard	plasma membrane	49.49	23.95
Bra003333.1-P	Field mustard	plasma membrane	43.41	21.31
Bra035966.1-P	Field mustard	plasma membrane	43.2	20.96
Bra007909.1-P	Field mustard	plasma membrane	42.8	20.83
Bra033670.1-P	Field mustard	plasma membrane	42.19	20.49
Bra030815.1-P	Field mustard	plasma membrane	42.19	20.29
Bra030813.1-P	Field mustard	plasma membrane	43.2	20.29
Bra007907.1-P	Field mustard	plasma membrane	42.19	20.25
Bra033958.1-P	Field mustard	plasma membrane	37.12	18.65
Bra016226.1-P	Field mustard	plasma membrane	8.11	7.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra028415	EnsemblPlants:Bra028415.1	EnsemblPlants:Bra028415.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EI00	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF54
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000254323E	SEG:seg	:	:	:

Description

AT1G29720 (E=1e-163) | protein kinase family protein

Coordinates

chrA02:+:180188..182462

Molecular Weight (calculated)

54675.0 Da

IEP (calculated)

7.259

GRAVY (calculated)

-0.160

Length

493 amino acids

Sequence
(BLAST)

001: MEIQFTEELY MSLGRRIFDV YVQGKLFLRD FNIKEEANGT MKPIVQELKD VNVTNHVLEI RLYWAGKGTT LIPNRGYYGP LISAISLCHM EKTKHHTNYP
101: MISGAIGGLV AILLLALGIY AARKRYIEDK STKERAQGLQ TNCFTWRQLQ AATNNFDQAN KLGEGGFGSV FKGELSNGTI IAVKQLSSES SQGNREFVNE
201: IGMISGLNHP NLVKLYGCCV EKNQLLLVYE YMEKNSLALA LFGKSSHKLN WSTRQKICVG IARGLEFLHH GSTIKMVHRD IKTTNVLLDT DFNAKISDFG
301: LARLHDGEHS HISTKVAGTI GYMAPEYALR GHLTEKVDVY SFGIVAMEIV SGRSTVKKKG SADDVPLINW ALTLEKRGDI MEVIDPILEG DFKSEEAVRM
401: IKVALLCTNS TLSLRPTMSE AVQMLEGDLK ITSVMPDHGL YGHNLSISKL MDIDTTTHGS SSTTTGTTDL EMKSSVSSYD LYPLNPESTI LNS

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.