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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • cytosol 3
  • mitochondrion 5
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g066600.2.1 Tomato cytosol, mitochondrion, plastid 97.7 97.9
KRH62073 Soybean cytosol, peroxisome 41.5 79.05
VIT_04s0008g03350.t01 Wine grape mitochondrion 75.4 74.73
AT2G25800.1 Thale cress plastid 73.2 74.16
KRH52752 Soybean nucleus 73.5 73.06
CDY35337 Canola cytosol 71.6 72.91
CDX77008 Canola cytosol 72.0 72.65
Bra034270.1-P Field mustard cytosol 72.1 72.61
KRH62072 Soybean cytosol, mitochondrion, nucleus 32.5 70.5
GSMUA_Achr3P16260_001 Banana cytosol, mitochondrion 59.4 67.19
GSMUA_Achr4P08290_001 Banana cytosol 52.5 65.87
GSMUA_Achr6P26320_001 Banana cytosol 57.4 65.6
Os09t0346700-01 Rice plasma membrane 64.0 64.97
Zm00001d020178_P002 Maize plastid 63.8 64.97
Zm00001d005638_P001 Maize plastid 63.5 64.66
EER98780 Sorghum plastid 63.0 63.77
TraesCS5D01G192300.1 Wheat mitochondrion, plastid 62.2 63.53
TraesCS5B01G185400.1 Wheat mitochondrion, plastid 62.2 63.53
TraesCS5A01G187000.1 Wheat mitochondrion, plastid 62.0 63.33
PGSC0003DMT400070575 Potato cytosol 56.8 59.73
Os08t0390100-01 Rice cytosol, plastid 38.7 57.5
HORVU5Hr1G041860.5 Barley plastid 55.9 56.87
GSMUA_Achr4P15490_001 Banana golgi, plasma membrane 52.9 56.04
OQU80385 Sorghum cytosol 45.6 54.94
HORVU4Hr1G057790.4 Barley plastid 53.8 54.62
TraesCS4B01G199800.1 Wheat plastid 54.0 54.49
TraesCS4D01G200800.1 Wheat plastid 53.5 54.04
TraesCS4A01G104100.2 Wheat cytosol 54.1 53.99
Zm00001d032274_P001 Maize plastid 49.4 53.23
PGSC0003DMT400017602 Potato mitochondrion 5.0 45.05
PGSC0003DMT400044198 Potato cytosol 38.9 38.17
PGSC0003DMT400034999 Potato cytosol 38.5 37.45
PGSC0003DMT400004282 Potato extracellular 6.4 24.62
Protein Annotations
EnsemblPlants:PGSC0003DMT400005705EnsemblPlantsGene:PGSC0003DMG400002233EntrezGene:102592170InterPro:DUF810InterPro:IPR014770InterPro:IPR014772
InterPro:Munc13_1InterPro:Munc13_dom-2PANTHER:PTHR31280PANTHER:PTHR31280:SF15PFAM:PF05664PFscan:PS51258
PFscan:PS51259PGSC:PGSC0003DMG400002233RefSeq:XP_006359749.1SEG:segUniParc:UPI000296A65AUniProt:M0ZQA9
MapMan:35.1:::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002233]
Coordinates
chr8:-:38874675..38881552
Molecular Weight (calculated)
110859.0 Da
IEP (calculated)
8.318
GRAVY (calculated)
-0.288
Length
1000 amino acids
Sequence
(BLAST)
001: MASLFRDRTL GYSRRDSTTA ASAAVSTMSL GSGATSSSRF STSSSALSPL PSPFPDLTPS LSTTDLQETA YEIFVASCRT STGKALTYIP SNSSDRSPSP
101: SPSASNTNSS SPSMQRSLTS TAASKMKKAL GLRSSSSSGI KRTEGSPGSG GKPKKPVTIG ELMRIQMKVS ENFDSRIRRA LLRITAGQVG RRIESTVLPL
201: ELLQQFKAAD FTDQREYDAW QKRNLKVLEA GLLLHPHMPL DKSNSAAQRL RQIIQAALDH PIETGRNNES MQVLRTAVMA LANRSSDGSL FDSCHWADGL
301: PLNLRLYEIL LEACFDVNDE ASIIEEVDEL MDLIKKTWGI LGLNQMLHNI CFSWVLFNRY VATGQVENDL LEAADSQLAE VAKDAKTTKD PSYAKILNST
401: LTAMLGWAEK RLLAYHDTFD AGNIESMPTI VSIGVSAAKI LVEDISNEYR RRRKGEVDVA RSRIDTYIRS SLRTAFAQLM EKADSSRRAS RHQPNPLPVL
501: AILAKDVGEQ ASKEKEIFSP ILKRWHPFAA GVAVATLHVC YGNELKQFVS SITELTPDAV QVLRAADKLE KDLVQIAVED SVDSDDGGKA IIREMPPFEA
601: EGAIANMVKD WIKMRIDRLK EWVDRNLQQE VWNPQANEGG FAPSAVEVLR IIDETLDAFF LLPIPMHPAL LPDLMSGLDR CLQYYVSKAK SGCGSRNTYV
701: PTMPALTRCT TATKLWKKKD KTLNTKRNPQ VATMNSDNSS GVLQLCVRIN TFHRIRTELE VLEKRIITLL RNSESAHVED FSNGLGKKFE ISPAACIEGI
801: QQLSEAVGYR IVFHDLSPVL WDGLYIGEPS SSRIEPFLQE LEKNLTIISN TVNERVRTRI IADIMKASFD GFLVVLLAGG PSRIFTQQDS QIIEDDFKSL
901: KDVFWANGDG LPVDIINKSS TTVRDVLPLF RTDAESLIER FRRSTLETYG SSAKSRLPLP PTSGQWNPTE PNTLLRVLCY RNDDAASKFL KKTYNLPKKL
Best Arabidopsis Sequence Match ( AT2G25800.1 )
(BLAST)
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.