Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034270.1-P | Field mustard | cytosol | 98.98 | 97.89 |
| CDX77008 | Canola | cytosol | 98.17 | 97.28 |
| AT2G25800.1 | Thale cress | plastid | 92.26 | 91.79 |
| KRH62073 | Soybean | cytosol, peroxisome | 40.02 | 74.86 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 74.75 | 72.75 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 73.12 | 71.94 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 72.91 | 71.6 |
| KRH52752 | Soybean | nucleus | 73.12 | 71.37 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 33.4 | 71.15 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 59.06 | 65.61 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 57.43 | 64.46 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 52.14 | 64.24 |
| Os09t0346700-01 | Rice | plasma membrane | 63.24 | 63.05 |
| Zm00001d020178_P002 | Maize | plastid | 62.63 | 62.63 |
| EER98780 | Sorghum | plastid | 62.63 | 62.25 |
| Zm00001d005638_P001 | Maize | plastid | 62.22 | 62.22 |
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 61.51 | 61.7 |
| TraesCS5A01G187000.1 | Wheat | mitochondrion, plastid | 61.51 | 61.7 |
| TraesCS5B01G185400.1 | Wheat | mitochondrion, plastid | 61.41 | 61.59 |
| CDY40469 | Canola | cytosol | 57.54 | 59.41 |
| CDY35919 | Canola | cytosol | 57.43 | 59.24 |
| HORVU5Hr1G041860.5 | Barley | plastid | 56.82 | 56.77 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 52.75 | 54.87 |
| OQU80385 | Sorghum | cytosol | 46.23 | 54.7 |
| Os08t0390100-01 | Rice | cytosol, plastid | 37.27 | 54.38 |
| HORVU4Hr1G057790.4 | Barley | plastid | 53.16 | 52.99 |
| TraesCS4B01G199800.1 | Wheat | plastid | 53.16 | 52.67 |
| TraesCS4D01G200800.1 | Wheat | plastid | 53.05 | 52.63 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 53.16 | 52.1 |
| Zm00001d032274_P001 | Maize | plastid | 48.68 | 51.51 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 15.99 | 48.46 |
| CDY37722 | Canola | mitochondrion | 36.25 | 38.99 |
| CDY53192 | Canola | cytosol | 38.19 | 38.62 |
| CDY59176 | Canola | cytosol | 37.88 | 38.31 |
| CDX79528 | Canola | cytosol | 38.39 | 37.97 |
| CDX84688 | Canola | cytosol | 38.39 | 37.93 |
| CDY23738 | Canola | cytosol | 38.29 | 37.71 |
| CDX89822 | Canola | cytosol | 38.9 | 37.27 |
| CDY18234 | Canola | cytosol | 38.39 | 36.78 |
| CDX69997 | Canola | cytosol, peroxisome, plastid | 27.9 | 25.39 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 27.8 | 25.11 |
| CDY59387 | Canola | cytosol | 13.44 | 21.32 |
| CDX86760 | Canola | cytosol | 21.89 | 19.21 |
Protein Annotations
| EnsemblPlants:CDY35337 | EnsemblPlantsGene:GSBRNA2T00058307001 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF15 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 |
| ProteinID:CDY35337 | ProteinID:CDY35337.1 | SEG:seg | UniParc:UPI0004EDD7B3 | UniProt:A0A078HC25 | MapMan:35.1 |
Description
BnaA04g15100DBnaA04g15100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC25]
Coordinates
chrLK032350:+:166264..170221
Molecular Weight (calculated)
108887.0 Da
IEP (calculated)
7.884
GRAVY (calculated)
-0.256
Length
982 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHLFRELSL GHSKRETTPP PPSMASTIPS DLPPSPLGQL AVQFSESDLR LISYEIFVAA CRSATGKPLS SAVSSLSVAN PDSPSNGASP ASPAAQRSLT
101: AAAASKMKKA LGMNPGSGSG SGSGSGGKSK RPTTVGELMR IQMRVSESVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ QEYDAWLKRS
201: LKVLEAGLLL HPRVPLDKTS SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YEMLLEACFD SSDATSMVEE
301: VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLYACES QLAEVAKDAK TTKDPEYSQV LSATLSAILG WAEKRLLAYH DTFDRSNVGT
401: MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTAF AQASRMEKAD SSRRASRNQK NPLPVLAILA KDIGELAVQE KRMFSPIWKR
501: WHPFAAGVAV ATLHVCYGNE IKQFISGISE LTPDAVQVLR AADKLEKDLV QIAVEDSVDS DDGGKAIIRE MPPFEAETVI ANLVKDWIKA RIDRLKEWVD
601: RNLQQEVWNP VENQEGGYAL SAAEVLRITD ETLEAFFQLP IPMHPAVLPD LIIGLDKYLQ YYVSKAKSGC GSRTTYMPTM PALTRCTTES KFQGVWKKKE
701: KSPPSQKKNS QVPIANGEAG SFGVTQICIR INSLHKIRSE LDVVEKRVIT HLRNCESAHT DDFSNGLGKK FELTPAACIE GVQQLSESLA YKVVFHDLSH
801: ALWDGLYIGD LSSSRIEPFL KELEQNLTVI AETVHERVRT RIITDLMRAS FDGFLLVLLA GGPSRAFTIQ DSQIMEQDFK SMKDLFWANG DGLAMDLIDK
901: FSTTVRGVLP LFSTDTDSLI ERFKGMTLEA YGSSAKSRLP LPPTSGQWSG MEPNTLLRVL CYRNDESATR FLKKTYNLPK KL
101: AAAASKMKKA LGMNPGSGSG SGSGSGGKSK RPTTVGELMR IQMRVSESVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ QEYDAWLKRS
201: LKVLEAGLLL HPRVPLDKTS SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YEMLLEACFD SSDATSMVEE
301: VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLYACES QLAEVAKDAK TTKDPEYSQV LSATLSAILG WAEKRLLAYH DTFDRSNVGT
401: MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTAF AQASRMEKAD SSRRASRNQK NPLPVLAILA KDIGELAVQE KRMFSPIWKR
501: WHPFAAGVAV ATLHVCYGNE IKQFISGISE LTPDAVQVLR AADKLEKDLV QIAVEDSVDS DDGGKAIIRE MPPFEAETVI ANLVKDWIKA RIDRLKEWVD
601: RNLQQEVWNP VENQEGGYAL SAAEVLRITD ETLEAFFQLP IPMHPAVLPD LIIGLDKYLQ YYVSKAKSGC GSRTTYMPTM PALTRCTTES KFQGVWKKKE
701: KSPPSQKKNS QVPIANGEAG SFGVTQICIR INSLHKIRSE LDVVEKRVIT HLRNCESAHT DDFSNGLGKK FELTPAACIE GVQQLSESLA YKVVFHDLSH
801: ALWDGLYIGD LSSSRIEPFL KELEQNLTVI AETVHERVRT RIITDLMRAS FDGFLLVLLA GGPSRAFTIQ DSQIMEQDFK SMKDLFWANG DGLAMDLIDK
901: FSTTVRGVLP LFSTDTDSLI ERFKGMTLEA YGSSAKSRLP LPPTSGQWSG MEPNTLLRVL CYRNDESATR FLKKTYNLPK KL
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.