CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039035.1-P	Field mustard	cytosol	99.26	99.26
CDY40469	Canola	cytosol	98.53	98.63
AT2G20010.2	Thale cress	nucleus	90.86	90.86
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	57.14	65.07
KRH60226	Soybean	cytosol	36.13	60.46
KRH74278	Soybean	cytosol	60.61	60.23
KRH07260	Soybean	cytosol	59.98	60.04
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	55.04	59.28
GSMUA_Achr4P08290_001	Banana	cytosol	48.21	57.59
CDY35337	Canola	cytosol	59.24	57.43
GSMUA_Achr6P26320_001	Banana	cytosol	52.73	57.37
PGSC0003DMT400070575	Potato	cytosol	57.25	57.31
CDX77008	Canola	cytosol	59.35	57.01
Os09t0346700-01	Rice	plasma membrane	58.93	56.95
Solyc05g018180.2.1	Tomato	cytosol, nucleus	56.83	56.71
EER98780	Sorghum	plastid	58.82	56.68
Zm00001d005638_P001	Maize	plastid	58.4	56.62
Zm00001d020178_P002	Maize	plastid	58.3	56.52
KRH41514	Soybean	cytosol	46.64	56.35
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	57.67	56.08
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	57.56	55.98
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	57.46	55.87
KRH60225	Soybean	cytosol	21.85	55.47
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	52.21	52.65
HORVU4Hr1G057790.4	Barley	plastid	54.1	52.28
TraesCS4D01G200800.1	Wheat	plastid	53.78	51.72
TraesCS4B01G199800.1	Wheat	plastid	53.78	51.66
OQU80385	Sorghum	cytosol	44.96	51.57
TraesCS4A01G104100.2	Wheat	cytosol	54.1	51.4
HORVU5Hr1G041860.5	Barley	plastid	52.73	51.07
Os08t0390100-01	Rice	cytosol, plastid	36.03	50.97
Zm00001d032274_P001	Maize	plastid	48.74	50.0
CDY37722	Canola	mitochondrion	36.03	37.57
CDY53192	Canola	cytosol	37.71	36.97
CDY23738	Canola	cytosol	38.55	36.81
CDY59176	Canola	cytosol	37.5	36.77
CDX84688	Canola	cytosol	37.5	35.92
CDX79528	Canola	cytosol	37.29	35.75
CDY18234	Canola	cytosol	37.6	34.93
CDX89822	Canola	cytosol	37.5	34.83
CDX69997	Canola	cytosol, peroxisome, plastid	29.2	25.76
CDX99020	Canola	cytosol, peroxisome, plastid	29.31	25.67
CDY59387	Canola	cytosol	14.5	22.29
CDX86760	Canola	cytosol	23.95	20.38

Protein Annotations

EnsemblPlants:CDY35919	EnsemblPlantsGene:GSBRNA2T00059469001	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772	InterPro:Munc13_1
InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664	PFscan:PS51258	PFscan:PS51259
ProteinID:CDY35919	ProteinID:CDY35919.1	SEG:seg	UniParc:UPI0004EE59BC	UniProt:A0A078HER9	MapMan:35.1

Description

BnaA07g00680DBnaA07g00680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HER9]

Coordinates

chrLK032363:-:342706..346085

Molecular Weight (calculated)

106065.0 Da

IEP (calculated)

7.798

GRAVY (calculated)

-0.264

Length

952 amino acids

Sequence
(BLAST)

001: MEESLPSPFG DPAPNLSDSE LRETAYEILV AACRTTGSRP LTFIPQSPKS DRSNGVSLSP SPSLHRSLTS TAASRVKKAL GMKKRSGGGG DVREGESSGQ
101: PDRVKKSVTV GELVRVQMRI SEQIDSRIRR ALLRIASGQL GRRVETMVLP LELLQQLKAT DFPDHDEYIS WQRRNLKLLE AGLILHPHVP LSKSDKSVQQ
201: LKQMIRSGLE RPLDTGKITG ESQNLRSVVM SLATRSNNDG IGPDTCHWAD GFPLNLRIYQ MLLESCFDVN DELSVVEEVD EVLELIKKTW PVLGMNQMVH
301: NVCFLWVLFN RYVATGQVEN DLLVAAHNLI LEVESEAKEA NDPKYSKISS SVLSLILDWA EKRLLAYHDT FNIDNVETLE TTVSLGISVA KVLGEDASSE
401: YRRKKKNVDS GRDRVDTYIR SSLRMAFSQT KKMVEHSKRS KSRQSSTSNL PALATLAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSDDG GKSVIREMPP FEAEVVIGNL VKSWIKTRVD RLKEWIDRNL QQEAWNPKLN KLGIAPSSVD
601: VLRMVDETLE AFFLLPILLH TVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPALPALT RCSVGSRLHG VFKKKEKPMA ASNRRKSQLG TSNDSAEILQ
701: FCCRINTLHY IRTEIESSGR KTLNRLPESD IAAFDGKAKI FEQSIGYCSK GVQQLSEATA YKIVFHDLSN VLWDGLYVGE VSSSRVESFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRCFTVQ DSDAVDEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTESLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EANTLLRVLC YRYDESATKF LKRTYNLPRK LT

Best Arabidopsis Sequence Match ( AT2G20010.2 )
(BLAST)

001: MESLPSPFGD PAPNLSNSEL RETAYEILVA ACRSTGSRPL TYIPQSPKSD RSNGLTTASL SPSPSLHRSL TSTAASKVKK ALGMKKRIGD GDGGAGESSS
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT

Arabidopsis Description

Gls protein (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q9SL80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.