Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53192 | Canola | cytosol | 98.66 | 98.66 |
| CDY18234 | Canola | cytosol | 90.94 | 86.15 |
| CDX89822 | Canola | cytosol | 90.11 | 85.37 |
| AT1G04470.1 | Thale cress | cytosol | 89.8 | 84.25 |
| CDX84688 | Canola | cytosol | 84.04 | 82.09 |
| CDY23738 | Canola | cytosol | 83.01 | 80.84 |
| CDX79528 | Canola | cytosol | 82.08 | 80.26 |
| CDY37722 | Canola | mitochondrion | 74.87 | 79.63 |
| VIT_05s0049g01560.t01 | Wine grape | nucleus | 68.18 | 64.9 |
| KRG92279 | Soybean | cytosol | 65.09 | 62.45 |
| KRH34531 | Soybean | cytosol | 64.68 | 61.69 |
| KRG90363 | Soybean | nucleus | 64.37 | 61.46 |
| KRH33633 | Soybean | nucleus | 63.95 | 61.06 |
| PGSC0003DMT400044198 | Potato | cytosol | 62.2 | 59.27 |
| Solyc09g090480.2.1 | Tomato | cytosol | 61.79 | 58.88 |
| Solyc03g005630.2.1 | Tomato | cytosol | 60.25 | 57.13 |
| PGSC0003DMT400034999 | Potato | cytosol | 60.45 | 57.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.05 | 55.54 |
| GSMUA_Achr4P29190_001 | Banana | cytosol | 49.43 | 55.17 |
| GSMUA_Achr1P10950_001 | Banana | cytosol | 52.01 | 54.18 |
| GSMUA_Achr1P03530_001 | Banana | cytosol | 49.12 | 53.9 |
| GSMUA_Achr1P16870_001 | Banana | cytosol | 49.95 | 53.65 |
| Os10t0471000-01 | Rice | cytosol, mitochondrion | 18.13 | 53.33 |
| KRH70255 | Soybean | plastid | 59.53 | 53.03 |
| KRH08629 | Soybean | cytosol | 59.42 | 52.65 |
| OQU91659 | Sorghum | cytosol | 39.03 | 50.07 |
| TraesCS1B01G168300.2 | Wheat | cytosol | 49.85 | 49.59 |
| TraesCS1A01G150700.1 | Wheat | cytosol | 50.05 | 49.04 |
| TraesCS1D01G147700.1 | Wheat | mitochondrion | 50.05 | 49.04 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 49.74 | 48.99 |
| TraesCS4B01G338200.1 | Wheat | mitochondrion | 51.6 | 48.88 |
| TraesCS4D01G334500.1 | Wheat | mitochondrion | 51.49 | 48.59 |
| Zm00001d032737_P001 | Maize | cytosol | 49.95 | 48.45 |
| EER92892 | Sorghum | mitochondrion | 52.21 | 48.38 |
| Os03t0138600-01 | Rice | nucleus, plasma membrane | 49.74 | 48.3 |
| TraesCS5A01G507900.1 | Wheat | mitochondrion | 50.88 | 47.96 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 50.46 | 47.57 |
| Zm00001d027590_P001 | Maize | mitochondrion | 51.18 | 47.51 |
| Zm00001d010939_P004 | Maize | mitochondrion | 45.11 | 43.28 |
| EES18963 | Sorghum | mitochondrion | 45.01 | 41.74 |
| CDY35337 | Canola | cytosol | 38.31 | 37.88 |
| CDX77008 | Canola | cytosol | 38.31 | 37.54 |
| CDY35919 | Canola | cytosol | 36.77 | 37.5 |
| CDY40469 | Canola | cytosol | 36.66 | 37.43 |
| CDX69997 | Canola | cytosol, peroxisome, plastid | 27.5 | 24.75 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 27.6 | 24.66 |
| CDX86760 | Canola | cytosol | 21.63 | 18.77 |
| CDY59387 | Canola | cytosol | 11.95 | 18.74 |
Protein Annotations
| EnsemblPlants:CDY59176 | EnsemblPlantsGene:GSBRNA2T00025694001 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF1 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 |
| ProteinID:CDY59176 | ProteinID:CDY59176.1 | SEG:seg | UniParc:UPI0004EEDAE4 | UniProt:A0A078J762 | MapMan:35.1 |
Description
BnaC08g50100DBnaC08g50100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J762]
Coordinates
chrLK033736:-:15998..19953
Molecular Weight (calculated)
108156.0 Da
IEP (calculated)
6.480
GRAVY (calculated)
-0.276
Length
971 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHHSRRESF SDMANSVVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR TALTFYSKHN GGDNQGEGAG GGGSGSGFGS LGRKEVVTTP
101: TSRVKRALGQ GAGFLTVPPS RPRRPLTSAE IMRQQMRVTE QGDTRLRKTL TRTLVGQTGR GAETIILPLE LLRHVKTSEF SDAHEYQIWQ RRQLKVLEAG
201: LLLHPSIPLD KTNNFAMRLR EIIRQSETKP IDTGKSSETM STLCNAVVSL ACRNANQDVC HWSDGYPLNV HLYVALLQSI FDIRDETLVL DEIDELLELM
301: KKTWSMLGIT RPVHNLCFTW VLFHQYIVTS QMEPDLLGAS HAMLAEVAND AKKSDREALY VKLLTSTLAS MQGWTEKRLL SYHDYFQRGN VGLIENLLPL
401: ALSSSKIVGE DVTISQGSSQ EKGDVKLVDS SGDRVDYYIR ASIKNSFSKV IENMKTKTAV TEEGEEAAKM LLELAKETEE LALRERECFS PILKRWYSVA
501: AGVASVSLHQ CYGSILMQYL SGRSTITKET VEVLQTAGKL EKVLVQMVAE ESEECEDGGK GLVREMVPYE VDSIILRLLK QWTEEKLKAG HECLSRAKEA
601: ETWNPKSKSE PYAQSAGELM KLAKDAIDEF FDIPIGITED LVHDLAEGLE QLFQEYTAFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCTASGE
701: DLNNLSGGPP VIADGNHPRP STSRGTQRLY IRLNTLHFLS TQLHSLNKAL SLNPKVLPAA PGIETACQHV SEVAAYRLIF LDSYSVFYES LYTGDVANAR
801: IKPALRILKQ NLTLMTAILA DRAQALAMRE VMKASFEVVL TVLLAGGHSR VFYRSDHELI EEDFESLKKV YCTCGEGLIP EEVVDREAET VEGVIQLMSQ
901: PTEQLMEDFS IVTCESSGMG LVGAGQKLPM PPTTGRWNRS DPNTILRVLC YRDDRVANQF LKKSFQLGKR R
101: TSRVKRALGQ GAGFLTVPPS RPRRPLTSAE IMRQQMRVTE QGDTRLRKTL TRTLVGQTGR GAETIILPLE LLRHVKTSEF SDAHEYQIWQ RRQLKVLEAG
201: LLLHPSIPLD KTNNFAMRLR EIIRQSETKP IDTGKSSETM STLCNAVVSL ACRNANQDVC HWSDGYPLNV HLYVALLQSI FDIRDETLVL DEIDELLELM
301: KKTWSMLGIT RPVHNLCFTW VLFHQYIVTS QMEPDLLGAS HAMLAEVAND AKKSDREALY VKLLTSTLAS MQGWTEKRLL SYHDYFQRGN VGLIENLLPL
401: ALSSSKIVGE DVTISQGSSQ EKGDVKLVDS SGDRVDYYIR ASIKNSFSKV IENMKTKTAV TEEGEEAAKM LLELAKETEE LALRERECFS PILKRWYSVA
501: AGVASVSLHQ CYGSILMQYL SGRSTITKET VEVLQTAGKL EKVLVQMVAE ESEECEDGGK GLVREMVPYE VDSIILRLLK QWTEEKLKAG HECLSRAKEA
601: ETWNPKSKSE PYAQSAGELM KLAKDAIDEF FDIPIGITED LVHDLAEGLE QLFQEYTAFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCTASGE
701: DLNNLSGGPP VIADGNHPRP STSRGTQRLY IRLNTLHFLS TQLHSLNKAL SLNPKVLPAA PGIETACQHV SEVAAYRLIF LDSYSVFYES LYTGDVANAR
801: IKPALRILKQ NLTLMTAILA DRAQALAMRE VMKASFEVVL TVLLAGGHSR VFYRSDHELI EEDFESLKKV YCTCGEGLIP EEVVDREAET VEGVIQLMSQ
901: PTEQLMEDFS IVTCESSGMG LVGAGQKLPM PPTTGRWNRS DPNTILRVLC YRDDRVANQF LKKSFQLGKR R
0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
Arabidopsis Description
F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.