Factsheet for GSMUA_Achr4P29190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P03530_001	Banana	cytosol	63.68	62.6
OQU91659	Sorghum	cytosol	48.05	55.22
GSMUA_AchrUn_...	Banana	cytosol	55.29	54.97
GSMUA_Achr1P10950_001	Banana	cytosol	57.13	53.33
Bra032507.1-P	Field mustard	mitochondrion, plastid	55.17	51.95
CDY37722	Canola	mitochondrion	54.48	51.92
Os10t0471000-01	Rice	cytosol, mitochondrion	19.54	51.52
Os03t0138600-01	Rice	nucleus, plasma membrane	59.08	51.4
VIT_05s0049g01560.t01	Wine grape	nucleus	60.11	51.27
GSMUA_Achr1P16870_001	Banana	cytosol	52.87	50.88
CDY59176	Canola	cytosol	55.17	49.43
Zm00001d032737_P001	Maize	cytosol	56.78	49.35
CDY53192	Canola	cytosol	55.06	49.33
TraesCS4B01G338200.1	Wheat	mitochondrion	57.59	48.88
EER92892	Sorghum	mitochondrion	58.85	48.85
TraesCS4D01G334500.1	Wheat	mitochondrion	57.47	48.59
TraesCS1B01G168300.2	Wheat	cytosol	54.48	48.57
PGSC0003DMT400044198	Potato	cytosol	56.67	48.38
Zm00001d027590_P001	Maize	mitochondrion	58.16	48.37
TraesCS5A01G507900.1	Wheat	mitochondrion	57.13	48.25
CDX79528	Canola	cytosol	55.06	48.24
CDX84688	Canola	cytosol	55.06	48.19
Solyc09g090480.2.1	Tomato	cytosol	56.44	48.18
HORVU4Hr1G083660.3	Barley	mitochondrion	56.44	47.67
CDY23738	Canola	cytosol	54.48	47.54
TraesCS1A01G150700.1	Wheat	cytosol	54.02	47.43
TraesCS1D01G147700.1	Wheat	mitochondrion	54.02	47.43
HORVU1Hr1G039810.1	Barley	mitochondrion	53.56	47.26
KRG90363	Soybean	nucleus	55.17	47.2
PGSC0003DMT400034999	Potato	cytosol	55.63	47.08
KRH33633	Soybean	nucleus	54.94	47.0
CDX89822	Canola	cytosol	55.17	46.83
AT2G33420.1	Thale cress	cytosol	55.86	46.78
CDY18234	Canola	cytosol	55.06	46.73
Solyc03g005630.2.1	Tomato	cytosol	54.94	46.68
KRH34531	Soybean	cytosol	54.25	46.37
Bra015318.1-P	Field mustard	cytosol	55.17	46.29
KRG92279	Soybean	cytosol	53.79	46.25
AT1G04470.1	Thale cress	cytosol	54.83	46.09
Bra022939.1-P	Field mustard	cytosol	54.83	46.04
Bra021851.1-P	Field mustard	cytosol	54.6	45.85
KRH70255	Soybean	plastid	51.15	40.83
KRH08629	Soybean	cytosol	50.69	40.24
GSMUA_Achr4P08290_001	Banana	cytosol	33.91	37.01
GSMUA_Achr6P26320_001	Banana	cytosol	35.75	35.54
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	35.86	35.29
GSMUA_Achr9P06130_001	Banana	nucleus	7.13	34.07
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	34.71	31.99
GSMUA_Achr2P01130_001	Banana	extracellular, golgi	8.28	22.43
GSMUA_Achr2P01140_001	Banana	cytosol	18.74	20.02
GSMUA_Achr11P...	Banana	cytosol	22.07	16.52

Protein Annotations

EnsemblPlants:GSMUA_Achr4P29190_001	EnsemblPlants:GSMUA_Achr4T29190_001	EnsemblPlantsGene:GSMUA_Achr4G29190_001	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772
InterPro:Munc13_1	InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF1	PFAM:PF05664	PFscan:PS51258
PFscan:PS51259	SEG:seg	UniParc:UPI000295A976	UniProt:M0ST31	MapMan:35.1	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G29190_001]

Coordinates

chr4:+:27264255..27272454

Molecular Weight (calculated)

97155.1 Da

IEP (calculated)

6.046

GRAVY (calculated)

-0.049

Length

870 amino acids

Sequence
(BLAST)

001: MNLSNSWRPM TSAEIMRLQM RVTEQSDRRL RKTLMRTLVG QVGRKAETII LPLELLRQLK PSEFNDAQEY HQWQRRQLKI LEAGLILYPS VPVDRHSPAA
101: ARLLEIIRAS ELKPIDTSKN SETMRNLCNA VVALVWRSSS GASTEVCHWA DGYPLNVHLY LALLHSIFDL REDTVVLDEV DELIELMKKT WSTLGINKMI
201: HNVCFAWLFF QRYLETGQIE PDLLCATLAT LVEVASNAKK ADRDANYVNL LSGALTVMQS WAEAKVLDYH ECFDKETIAS MENIVSLALS TTNIIGEDPL
301: DNGASLVDDD GQAAMDPSVN RVDYYIRSSM RSAFAKILEN GASHGDSVIV GINDDPSNIL LQLAEETEEL ALVEKDLFSP VLRKWHQVPT AAAVVTIHSC
401: FGIVLKQYLS KVTCLTNELV RVLQSAGKLE KLLVQMVVED SADCEDGGKG VVREMVPYDV DSIVAGLLKT WIDERLRIGK ECLSRAKETE SWMPRSKNEP
501: YAQSSMDLMK LAKVTVDEFF EIPVGARDDM VQDLADGLET IFQEYTTFVA ACGNKQSYVP SLPPLTRCNQ DSNLVRLWKR AAVRCSVGIG RSNGKDGITN
601: MNHPRPSTSR GTQRLYIRLN TLHYVLAHLH ALDKSLSFFS RSGPSPTGRH TAANRRLAPS HHLGLARSSV QSAIQYVSEV AAYRLIFLDS RHSFYDGLYV
701: ESVTDARIQP GLRILKQNLT LLVSILTDRA QPLTVKEVMK ASFEAFLMVL LAGGSERAFA RGDYESVVDD FRSLKRVFCT CGEGLVLEEV VNREAEVVEG
801: IVALMALPTE RLIEDFSIAA CEASGLIFQL LELLPAFRST YLQSFISQLL LIICANSSVT PKHNASQLIF

Best Arabidopsis Sequence Match ( AT2G33420.1 )
(BLAST)

0001: MTHHHRRESF SVTPSTMGGS VVLCPNTDLL WPFGKLEGLD RDDIRETAYE IFFTACRSSP GFGGRTALTF YSNHNSNDHH GDGGGGIGSG GSTGVGSGFG
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR

Arabidopsis Description

Uncharacterized protein At2g33420 [Source:UniProtKB/TrEMBL;Acc:O22792]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.