Factsheet for GSMUA_Achr1P16870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	57.74	59.66
GSMUA_Achr1P10950_001	Banana	cytosol	58.74	56.97
GSMUA_Achr4P29190_001	Banana	cytosol	50.88	52.87
CDY53192	Canola	cytosol	53.65	49.95
CDY59176	Canola	cytosol	53.65	49.95
CDY37722	Canola	mitochondrion	49.67	49.18
GSMUA_Achr1P03530_001	Banana	cytosol	47.68	48.7
Bra032507.1-P	Field mustard	mitochondrion, plastid	49.67	48.59
CDY23738	Canola	cytosol	53.43	48.45
VIT_05s0049g01560.t01	Wine grape	nucleus	54.65	48.43
CDX84688	Canola	cytosol	53.1	48.29
CDX79528	Canola	cytosol	52.99	48.24
PGSC0003DMT400044198	Potato	cytosol	53.87	47.79
CDX89822	Canola	cytosol	54.09	47.71
CDY18234	Canola	cytosol	53.98	47.61
Solyc09g090480.2.1	Tomato	cytosol	53.54	47.5
AT2G33420.1	Thale cress	cytosol	54.42	47.35
Bra015318.1-P	Field mustard	cytosol	54.2	47.25
AT1G04470.1	Thale cress	cytosol	54.09	47.25
Bra021851.1-P	Field mustard	cytosol	53.98	47.1
Bra022939.1-P	Field mustard	cytosol	53.87	47.01
KRH33633	Soybean	nucleus	52.77	46.9
Solyc03g005630.2.1	Tomato	cytosol	52.77	46.58
PGSC0003DMT400034999	Potato	cytosol	52.65	46.3
KRG90363	Soybean	nucleus	51.77	46.02
KRG92279	Soybean	cytosol	51.33	45.85
KRH34531	Soybean	cytosol	51.22	45.48
Zm00001d010939_P004	Maize	mitochondrion	48.78	43.58
EES18963	Sorghum	mitochondrion	49.34	42.6
KRH70255	Soybean	plastid	49.0	40.64
KRH08629	Soybean	cytosol	49.0	40.42
GSMUA_Achr6P26320_001	Banana	cytosol	37.39	38.63
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	37.72	38.57
GSMUA_Achr4P08290_001	Banana	cytosol	31.42	35.63
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	36.17	34.64
GSMUA_Achr9P06130_001	Banana	nucleus	6.42	31.87
GSMUA_Achr2P01140_001	Banana	cytosol	19.69	21.87
GSMUA_Achr2P01130_001	Banana	extracellular, golgi	7.52	21.18
GSMUA_Achr11P...	Banana	cytosol	23.56	18.33

Protein Annotations

EnsemblPlants:GSMUA_Achr1P16870_001	EnsemblPlants:GSMUA_Achr1T16870_001	EnsemblPlantsGene:GSMUA_Achr1G16870_001	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772
InterPro:Munc13_1	InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF1	PFAM:PF05664	PFscan:PS51258
PFscan:PS51259	SEG:seg	UniParc:UPI000296B0FF	UniProt:M0S0J5	MapMan:35.1	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G16870_001]

Coordinates

chr1:-:12566210..12569616

Molecular Weight (calculated)

100776.0 Da

IEP (calculated)

6.011

GRAVY (calculated)

-0.180

Length

904 amino acids

Sequence
(BLAST)

001: MGSRRRRSGS FSFMEEQPEE KEEEGELQWP FGRLDALGRD ELRESAYELF VACCRFSQGS SGRAPPSRHP ADGSDAGTKA GAGIMSATSR VKGALGLRAR
101: LAGPMRTMVN SGSPQRPMTS AEIMRQQMGV TEQSDTRLRK TLMRFLAGQV GRQAETIILP LELLRHLRPP DFVDSNEYHR WQRRQLKILE AGLVLHSWPP
201: CDRLNSSGLR LREILTASEL KPIDTSKHSE AMRNLCNCVM ALAWRYQNAT PVEACHWADG FPFNIHLYLS LLRSIFDLKD KTVILDEVDE LLELMKKTWA
301: TLGINKMVHT VCFTWVLFEQ YVRTGLVEPD LMGATLALLD EVANDAMRPE RESGYVKVLL PTMASLKAWA EKKLLDYHEG LEKGGRIEMM DNVLCLAFST
401: AKIISEETSS NASVGMLVKL DTGGDADDFS PINCVDRFIR ASLKCAFTKA QENCNGKVDS RVVDEEDPQE ALIKLAKETE ELALLEKENY SPLLKRWYPN
501: PTAVAVVTLH SCYGAVLKQY LLKTSVLTNE LVRVLHTAGN LEKVLIQMAA EDSVGAEGGG KGILSEMIPY QVDSIIFNLI KRWVDDRLRM ARGCFNRAKE
601: TESWNPKSKS EPYAESAVDL MQLAKMTVDE FFEIQVEAKD ELGRDLADGL DTLFKEYCSF AASCGSKESF IPALPPLTRC NQDSMVAQLW KRAAAPCTVG
701: ADPSLVLLAA FRLIFVDSSH SFYDSLYFGS VYHARIHPTL QVLNQNLTYL TSVLIDGAQP QAVCEVMKAS FGAFLMVLLA GGSGRAFTRG DYDMLVEDFM
801: SLKHMFLGCG KGLVAEEVVE QQAEVVEGVL ALMRLPTEKL VEDFSIAACE ASGLGRSLET VPMPPTTGKW HCSDPNTMLR VLCHRNDDAA NRFLKKAFEL
901: PKRR

Best Arabidopsis Sequence Match ( AT2G33420.1 )
(BLAST)

0001: MTHHHRRESF SVTPSTMGGS VVLCPNTDLL WPFGKLEGLD RDDIRETAYE IFFTACRSSP GFGGRTALTF YSNHNSNDHH GDGGGGIGSG GSTGVGSGFG
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR

Arabidopsis Description

Uncharacterized protein At2g33420 [Source:UniProtKB/TrEMBL;Acc:O22792]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.