Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89822 | Canola | cytosol | 98.26 | 99.41 |
| Bra032507.1-P | Field mustard | mitochondrion, plastid | 80.42 | 90.26 |
| AT1G04470.1 | Thale cress | cytosol | 87.56 | 87.73 |
| Bra021851.1-P | Field mustard | cytosol | 81.39 | 81.47 |
| Bra022939.1-P | Field mustard | cytosol | 81.29 | 81.37 |
| VIT_05s0049g01560.t01 | Wine grape | nucleus | 65.86 | 66.96 |
| KRG92279 | Soybean | cytosol | 62.87 | 64.43 |
| KRH34531 | Soybean | cytosol | 62.39 | 63.56 |
| KRG90363 | Soybean | nucleus | 61.81 | 63.03 |
| KRH33633 | Soybean | nucleus | 61.43 | 62.64 |
| PGSC0003DMT400044198 | Potato | cytosol | 60.08 | 61.14 |
| Solyc09g090480.2.1 | Tomato | cytosol | 59.59 | 60.65 |
| PGSC0003DMT400034999 | Potato | cytosol | 58.44 | 58.95 |
| Solyc03g005630.2.1 | Tomato | cytosol | 58.15 | 58.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.6 | 57.6 |
| GSMUA_Achr1P10950_001 | Banana | cytosol | 50.82 | 56.55 |
| GSMUA_Achr4P29190_001 | Banana | cytosol | 46.29 | 55.17 |
| KRH70255 | Soybean | plastid | 57.47 | 54.68 |
| GSMUA_Achr1P16870_001 | Banana | cytosol | 47.25 | 54.2 |
| KRH08629 | Soybean | cytosol | 57.09 | 54.01 |
| GSMUA_Achr1P03530_001 | Banana | cytosol | 45.81 | 53.67 |
| Os10t0471000-01 | Rice | cytosol, mitochondrion | 17.07 | 53.64 |
| TraesCS1B01G168300.2 | Wheat | cytosol | 47.54 | 50.51 |
| OQU91659 | Sorghum | cytosol | 36.84 | 50.46 |
| EER92892 | Sorghum | mitochondrion | 50.72 | 50.19 |
| TraesCS4B01G338200.1 | Wheat | mitochondrion | 49.47 | 50.05 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 47.44 | 49.9 |
| TraesCS4D01G334500.1 | Wheat | mitochondrion | 49.37 | 49.76 |
| TraesCS1D01G147700.1 | Wheat | mitochondrion | 47.54 | 49.75 |
| TraesCS1A01G150700.1 | Wheat | cytosol | 47.44 | 49.65 |
| Zm00001d032737_P001 | Maize | cytosol | 47.73 | 49.45 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 48.89 | 49.22 |
| Os03t0138600-01 | Rice | nucleus, plasma membrane | 47.44 | 49.2 |
| TraesCS5A01G507900.1 | Wheat | mitochondrion | 48.79 | 49.13 |
| Zm00001d027590_P001 | Maize | mitochondrion | 49.18 | 48.76 |
| Zm00001d010939_P004 | Maize | mitochondrion | 42.62 | 43.68 |
| EES18963 | Sorghum | mitochondrion | 42.91 | 42.5 |
| Bra034270.1-P | Field mustard | cytosol | 37.32 | 38.97 |
| Bra039035.1-P | Field mustard | cytosol | 35.0 | 38.13 |
| Bra009303.1-P | Field mustard | cytosol, peroxisome, plastid | 26.42 | 25.44 |
| Bra040967.1-P | Field mustard | cytosol | 21.31 | 19.75 |
Protein Annotations
| EnsemblPlants:Bra015318.1 | EnsemblPlants:Bra015318.1-P | EnsemblPlantsGene:Bra015318 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 |
| InterPro:Munc13_1 | InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF1 | PFAM:PF05664 | PFscan:PS51258 |
| PFscan:PS51259 | SEG:seg | UniParc:UPI0002543EA8 | UniProt:M4DFP5 | MapMan:35.1 | : |
Description
AT1G04470 (E=0.0) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33420.1); Has 116 Blast hits to 109 proteins in 23 species: Archae - 0; Bacteria - 1; Metazoa - 4; Fungi - 4; Plants - 95; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Coordinates
chrA10:+:2499400..2505293
Molecular Weight (calculated)
114954.0 Da
IEP (calculated)
7.676
GRAVY (calculated)
-0.306
Length
1037 amino acids
Sequence
(BLAST)
(BLAST)
0001: MARHSRRESF SDTAASTVCP DTDLLWPFGK LDGLDKDEIR ETAYEIFFAA CRSSPGFGGR TALTFYSKHN GGDNEGDGIG GGGGSRKGSG FGSLGRKEVV
0101: TTPTSRVKRA LGLKMLKRSP SRRMTTASGA ASAPSSPGNG SSIGGGSSGH ISPGSGFLTV PPSRPRRPLT SAEIMRQQMR VTEQGDTRLR KTLTRTLVGQ
0201: SGKRAETIIL PLELLRHVKT SEFSDVHEYQ IWQRRQLKVI EAGLLLHPSI PLEKTNNFAM RLREVIRQSE TKPIDTGKTS ETMSTLCNVV ISLACRNTNT
0301: TASDVCHWAD GYPLNIHLYV ALLQSIFDVR DETLVLDEID ELLELMKKTW SMLGITRAMH NLCFTWVLFH QYIVTSQMEP DLLGASHAML AEVANDAKKS
0401: DREALYVKLL TSTLASMQGW TEKRLLSYHD YFQRGNVGLI ENLLPLALSS SRIVGEDVTI SQGSSQEKGD VKLVDSSGER VDYYIRASIK NAFSKVTESM
0501: KDKVSATEEG EEAAKMLLQL AKETEDLALR ERECFSPILK RWYSVAAGVA SVSLHQCYGS VLMQYLAGRS SITKETVEVL QTAGKLEKVL VQMVAEDSEE
0601: CEDGGKGLVR EMVPYEVESI ILRLLKQWID EKLKTVQECL SRAKEAETWN PKSKSEPYAQ SAGELMKLAN DAIAEFFEVP IGITEDLVHD LAEGLEQLFQ
0701: EYTTFVASCG SKQSYIPTLP PLTRCNRDSK FVKLLKKATP CTASGEDLNS LTGGSLGISD GHHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: SVLPATRKRH RERTNSSSSS YFDSTQAGIE TAFHHVSEVA AYRLIFLDSY SVFYERLYVG DVANARIKPA LRILKQNLTL MTAILADRAQ ALAMREVMKA
0901: SFEAVLTILL AGGHSRVFYR ADHELIEEDF ESLKKVYCTC GEGLISEEVV DREAETVEGV VQLMSQPTEQ LVEDFSIATC EASGMGLVGT GQRLPMPPTT
1001: GRWNRSDPNT ILRVLCYRDD RVANRFLKKS FQLGKRR
0101: TTPTSRVKRA LGLKMLKRSP SRRMTTASGA ASAPSSPGNG SSIGGGSSGH ISPGSGFLTV PPSRPRRPLT SAEIMRQQMR VTEQGDTRLR KTLTRTLVGQ
0201: SGKRAETIIL PLELLRHVKT SEFSDVHEYQ IWQRRQLKVI EAGLLLHPSI PLEKTNNFAM RLREVIRQSE TKPIDTGKTS ETMSTLCNVV ISLACRNTNT
0301: TASDVCHWAD GYPLNIHLYV ALLQSIFDVR DETLVLDEID ELLELMKKTW SMLGITRAMH NLCFTWVLFH QYIVTSQMEP DLLGASHAML AEVANDAKKS
0401: DREALYVKLL TSTLASMQGW TEKRLLSYHD YFQRGNVGLI ENLLPLALSS SRIVGEDVTI SQGSSQEKGD VKLVDSSGER VDYYIRASIK NAFSKVTESM
0501: KDKVSATEEG EEAAKMLLQL AKETEDLALR ERECFSPILK RWYSVAAGVA SVSLHQCYGS VLMQYLAGRS SITKETVEVL QTAGKLEKVL VQMVAEDSEE
0601: CEDGGKGLVR EMVPYEVESI ILRLLKQWID EKLKTVQECL SRAKEAETWN PKSKSEPYAQ SAGELMKLAN DAIAEFFEVP IGITEDLVHD LAEGLEQLFQ
0701: EYTTFVASCG SKQSYIPTLP PLTRCNRDSK FVKLLKKATP CTASGEDLNS LTGGSLGISD GHHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: SVLPATRKRH RERTNSSSSS YFDSTQAGIE TAFHHVSEVA AYRLIFLDSY SVFYERLYVG DVANARIKPA LRILKQNLTL MTAILADRAQ ALAMREVMKA
0901: SFEAVLTILL AGGHSRVFYR ADHELIEEDF ESLKKVYCTC GEGLISEEVV DREAETVEGV VQLMSQPTEQ LVEDFSIATC EASGMGLVGT GQRLPMPPTT
1001: GRWNRSDPNT ILRVLCYRDD RVANRFLKKS FQLGKRR
0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
Arabidopsis Description
F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.