Factsheet for Bra039035.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35919	Canola	cytosol	99.26	99.26
AT2G20010.2	Thale cress	nucleus	90.97	90.97
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	57.35	65.31
KRH60226	Soybean	cytosol	36.24	60.63
KRH74278	Soybean	cytosol	60.82	60.44
KRH07260	Soybean	cytosol	60.19	60.25
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	55.15	59.39
GSMUA_Achr4P08290_001	Banana	cytosol	48.42	57.84
PGSC0003DMT400070575	Potato	cytosol	57.35	57.41
GSMUA_Achr6P26320_001	Banana	cytosol	52.73	57.37
Os09t0346700-01	Rice	plasma membrane	59.14	57.16
Bra034270.1-P	Field mustard	cytosol	59.45	57.0
EER98780	Sorghum	plastid	59.03	56.88
Zm00001d005638_P001	Maize	plastid	58.61	56.82
Solyc05g018180.2.1	Tomato	cytosol, nucleus	56.93	56.81
Zm00001d020178_P002	Maize	plastid	58.51	56.72
KRH41514	Soybean	cytosol	46.85	56.6
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	57.88	56.28
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	57.77	56.18
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	57.67	56.08
KRH60225	Soybean	cytosol	21.85	55.47
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	52.31	52.75
HORVU4Hr1G057790.4	Barley	plastid	54.41	52.59
TraesCS4D01G200800.1	Wheat	plastid	53.89	51.82
OQU80385	Sorghum	cytosol	45.17	51.81
TraesCS4B01G199800.1	Wheat	plastid	53.89	51.77
TraesCS4A01G104100.2	Wheat	cytosol	54.41	51.7
Os08t0390100-01	Rice	cytosol, plastid	36.34	51.41
HORVU5Hr1G041860.5	Barley	plastid	52.94	51.27
Zm00001d032274_P001	Maize	plastid	48.95	50.22
Bra021851.1-P	Field mustard	cytosol	39.5	36.29
Bra032507.1-P	Field mustard	mitochondrion, plastid	35.19	36.26
Bra022939.1-P	Field mustard	cytosol	38.66	35.52
Bra015318.1-P	Field mustard	cytosol	38.13	35.0
Bra009303.1-P	Field mustard	cytosol, peroxisome, plastid	29.2	25.81
Bra040967.1-P	Field mustard	cytosol	24.16	20.55

Protein Annotations

EnsemblPlants:Bra039035.1	EnsemblPlants:Bra039035.1-P	EnsemblPlantsGene:Bra039035	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772
InterPro:Munc13_1	InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664	PFscan:PS51258
PFscan:PS51259	SEG:seg	UniParc:UPI0002540F9B	UniProt:M4FD65	MapMan:35.1	:

Description

AT2G20010 (E=0.0) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25800.1); Has 94 Blast hits to 89 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

Coordinates

chrA07:+:608428..611580

Molecular Weight (calculated)

106092.0 Da

IEP (calculated)

7.664

GRAVY (calculated)

-0.266

Length

952 amino acids

Sequence
(BLAST)

001: MEESLPSPFG DPAPNLSDSE LRETAYEILV AACRTTGSRP LTFIPQSPKS DRSNGVSLSP SPSLHRSLTS TAASRVKKAL GMKKRSGGGG DVREGESSGQ
101: PDRIKKSVTV GELVRVQMRI SEQIDSRIRR ALLRIASGQL GRRVETMVLP LELLQQLKAT DFPDHDEYIS WQRRNLKLLE AGLILHPHVP LSKSDKSVQQ
201: LKQMIRSGLE RPLDTGKITG ESQNLRSVVM SLATRSNNDG IGPDTCHWAD GFPLNLRIYQ MLLESCFDVN DELSVVEEVD EVLELIKKTW PVLGMNQMVH
301: NVCFLWVLFN RYVATGQVEN DLLVAAHNLL LEVENDAKET NDPAYSKISN SVLSLILDWA EKRLLAYHDT FNIDNVETLE TTVSLGISVA KVLGEDASSE
401: YRRKKKNVDS GRDRVDTYIR SSLRMAFSQT KKMVEHSKRS KSRQSSTSNL PALATLAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSDDG GKSVIREMPP FEAEVVIGNL VKSWIKTRVD RLKEWIDRNL QQEAWNPKLN KLGIAPSSVD
601: VLRMVDETLE AFFLLPILLH TVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPALPALT RCSVGSRLHG VFKKKEKPMA ASNRRKSQLG TSNDSAEILQ
701: FCCRINTLHY IRTEIESSGR KTLNRLPESD IAAFDGKAKI FEQSIGYCSK GVQQLSEATA YKIVFHDLSN VLWDGLYVGE VSSSRVESFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRCFTVQ DSDAVDEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTESLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EANTLLRVLC YRYDESATKF LKRTYNLPRK LT

Best Arabidopsis Sequence Match ( AT2G20010.2 )
(BLAST)

001: MESLPSPFGD PAPNLSNSEL RETAYEILVA ACRSTGSRPL TYIPQSPKSD RSNGLTTASL SPSPSLHRSL TSTAASKVKK ALGMKKRIGD GDGGAGESSS
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT

Arabidopsis Description

Gls protein (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q9SL80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.