Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 86.27 | 86.62 |
| TraesCS5B01G185400.1 | Wheat | mitochondrion, plastid | 86.06 | 86.41 |
| TraesCS5A01G187000.1 | Wheat | mitochondrion, plastid | 86.06 | 86.41 |
| Os09t0346700-01 | Rice | plasma membrane | 77.92 | 77.77 |
| EER98780 | Sorghum | plastid | 78.03 | 77.63 |
| Zm00001d020178_P002 | Maize | plastid | 77.31 | 77.39 |
| Zm00001d005638_P001 | Maize | plastid | 77.31 | 77.39 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 55.24 | 68.13 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 59.82 | 66.52 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 58.49 | 65.71 |
| VIT_11s0016g03330.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 54.02 | 63.52 |
| KRH62073 | Soybean | cytosol, peroxisome | 33.67 | 63.05 |
| HORVU4Hr1G057790.4 | Barley | plastid | 61.04 | 60.91 |
| CDY35337 | Canola | cytosol | 56.77 | 56.82 |
| AT2G25800.1 | Thale cress | plastid | 56.87 | 56.64 |
| Bra034270.1-P | Field mustard | cytosol | 57.07 | 56.5 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 57.99 | 56.49 |
| KRH52752 | Soybean | nucleus | 57.78 | 56.46 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 57.17 | 56.31 |
| CDX77008 | Canola | cytosol | 56.77 | 56.31 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 56.87 | 55.9 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 52.9 | 55.08 |
| CDY40469 | Canola | cytosol | 51.27 | 53.0 |
| AT2G20010.2 | Thale cress | nucleus | 51.27 | 52.94 |
| Bra039035.1-P | Field mustard | cytosol | 51.27 | 52.94 |
| CDY35919 | Canola | cytosol | 51.07 | 52.73 |
| KRH74278 | Soybean | cytosol | 51.37 | 52.71 |
| KRH07260 | Soybean | cytosol | 50.97 | 52.68 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 24.42 | 52.06 |
| KRH60226 | Soybean | cytosol | 29.81 | 51.49 |
| PGSC0003DMT400070575 | Potato | cytosol | 49.14 | 50.79 |
| KRH60225 | Soybean | cytosol | 19.33 | 50.67 |
| Solyc05g018180.2.1 | Tomato | cytosol, nucleus | 49.14 | 50.63 |
| KRH41514 | Soybean | cytosol | 39.78 | 49.62 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 13.73 | 41.67 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 32.55 | 32.45 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 33.67 | 32.14 |
| HORVU2Hr1G127720.4 | Barley | cytosol | 5.09 | 30.86 |
| HORVU2Hr1G041800.16 | Barley | cytosol | 13.22 | 30.02 |
| HORVU2Hr1G041780.2 | Barley | cytosol | 16.38 | 29.93 |
| HORVU2Hr1G095440.1 | Barley | cytosol, extracellular | 4.37 | 29.66 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G041860.5 | EnsemblPlantsGene:HORVU5Hr1G041860 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF810 |
| InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 | InterPro:Munc13_dom-2 | ncoils:Coil | PANTHER:PTHR31280 |
| PANTHER:PTHR31280:SF15 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B467AB6 | UniProt:A0A287QYN2 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:317639589..317646070
Molecular Weight (calculated)
106819.0 Da
IEP (calculated)
9.332
GRAVY (calculated)
-0.307
Length
983 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXLLLLQ WLRAPGRRVA RRLRAPVAVP RPRRAALRGR APRDRLRGPR RRVPHHRRQA PHLHPPSGPG LPGLGLLGVL
101: RQQLLLVAPA LAHLGRRQQD EEGARAQVLG LVQGRQPGER RXATVGELMR SQMRVSEPAD ARIRRGLLRI AAGQLGRRAE AMVLPLEFLQ QFKVSDFPDP
201: QEHEAWQGRN LKLIEAGLLV HPFVPLNKSD SSAQRLRQII RGAYDRPLET GKNSESMQVL RTAVMSLAGR SHDGTSDGCH WADGFPLNIH LYQMLVETCF
301: DSDDSTVVDE IDEVMELLKK TWVILGINQM LHNLCFAWAL FNHFVMSGQV DIELLSAAEN QLVEVAKDAK TTKDPNYCKV LSSTLSSIMG WTEKRLLAYH
401: ETFNTSNIES MQGIVSIGVT AAKVLVEDIS HEYRRRRKDE TNVARSRIET YVRSSLRTAF AQRMEEADSK RSSRNPTPVM SILAKDIGDL AIKEKNLYSP
501: ILKTWHPLAS GVAVATLHSC YGSELKQFIA GLTELTPETV QVLKSADKLE KDLVNIAVED SVDSDDGGKS LIREMPPYEA ENAIANLVKV WIKERVDRLK
601: GWVDRSLKQE TWSPGANRDN FAPSSVEMLR IIGETLDAFF QLPIPMHQAL LPDLTAGLDR SLQLYASKAK SGCGARGSFM PELPPLTRCE VGSKLLFKKK
701: DKPQNPQHRG PQNGATNGTD PLGLPQLCVR LNTLQYIRSE LENLEKKIKT CLRNVESAQA DITNGLEFKF ELCQAACQEG IQHLCETTAY KVTFFDLGHI
801: LWDTLYIGDI ASSRVDLLLR ELDPILETIS GTVHIKVRNR AITALMKATF DGFLLVILAG GPLRAFTRQD SQIIEDDFRS LRDLFLADGD GLPEELVDKA
901: SSQVKNVLPL LRTDSEGLIX XFKRLIADSD QTRTASRGKL PMPMTTGHWS PNDANTVLRV LCYRHEEAAT RFLKKTYGLP KKL
101: RQQLLLVAPA LAHLGRRQQD EEGARAQVLG LVQGRQPGER RXATVGELMR SQMRVSEPAD ARIRRGLLRI AAGQLGRRAE AMVLPLEFLQ QFKVSDFPDP
201: QEHEAWQGRN LKLIEAGLLV HPFVPLNKSD SSAQRLRQII RGAYDRPLET GKNSESMQVL RTAVMSLAGR SHDGTSDGCH WADGFPLNIH LYQMLVETCF
301: DSDDSTVVDE IDEVMELLKK TWVILGINQM LHNLCFAWAL FNHFVMSGQV DIELLSAAEN QLVEVAKDAK TTKDPNYCKV LSSTLSSIMG WTEKRLLAYH
401: ETFNTSNIES MQGIVSIGVT AAKVLVEDIS HEYRRRRKDE TNVARSRIET YVRSSLRTAF AQRMEEADSK RSSRNPTPVM SILAKDIGDL AIKEKNLYSP
501: ILKTWHPLAS GVAVATLHSC YGSELKQFIA GLTELTPETV QVLKSADKLE KDLVNIAVED SVDSDDGGKS LIREMPPYEA ENAIANLVKV WIKERVDRLK
601: GWVDRSLKQE TWSPGANRDN FAPSSVEMLR IIGETLDAFF QLPIPMHQAL LPDLTAGLDR SLQLYASKAK SGCGARGSFM PELPPLTRCE VGSKLLFKKK
701: DKPQNPQHRG PQNGATNGTD PLGLPQLCVR LNTLQYIRSE LENLEKKIKT CLRNVESAQA DITNGLEFKF ELCQAACQEG IQHLCETTAY KVTFFDLGHI
801: LWDTLYIGDI ASSRVDLLLR ELDPILETIS GTVHIKVRNR AITALMKATF DGFLLVILAG GPLRAFTRQD SQIIEDDFRS LRDLFLADGD GLPEELVDKA
901: SSQVKNVLPL LRTDSEGLIX XFKRLIADSD QTRTASRGKL PMPMTTGHWS PNDANTVLRV LCYRHEEAAT RFLKKTYGLP KKL
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.