Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62073 | Soybean | cytosol, peroxisome | 51.59 | 98.86 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 44.43 | 96.96 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 74.95 | 74.73 |
| AT2G25800.1 | Thale cress | plastid | 72.17 | 73.56 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 73.06 | 73.5 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 72.86 | 73.45 |
| CDX77008 | Canola | cytosol | 72.07 | 73.16 |
| CDY35337 | Canola | cytosol | 71.37 | 73.12 |
| Bra034270.1-P | Field mustard | cytosol | 71.77 | 72.71 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 57.75 | 65.72 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 56.66 | 65.14 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 51.29 | 64.74 |
| Os09t0346700-01 | Rice | plasma membrane | 62.13 | 63.45 |
| Zm00001d020178_P002 | Maize | plastid | 61.43 | 62.93 |
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 61.03 | 62.72 |
| Zm00001d005638_P001 | Maize | plastid | 61.13 | 62.63 |
| TraesCS5B01G185400.1 | Wheat | mitochondrion, plastid | 60.93 | 62.61 |
| TraesCS5A01G187000.1 | Wheat | mitochondrion, plastid | 60.93 | 62.61 |
| EER98780 | Sorghum | plastid | 61.43 | 62.55 |
| KRH74278 | Soybean | cytosol | 57.36 | 60.23 |
| KRH07260 | Soybean | cytosol | 56.86 | 60.15 |
| KRH60225 | Soybean | cytosol | 21.67 | 58.13 |
| KRH60226 | Soybean | cytosol | 32.7 | 57.82 |
| HORVU5Hr1G041860.5 | Barley | plastid | 56.46 | 57.78 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 52.78 | 56.25 |
| OQU80385 | Sorghum | cytosol | 45.53 | 55.18 |
| Os08t0390100-01 | Rice | cytosol, plastid | 36.88 | 55.13 |
| KRH41514 | Soybean | cytosol | 43.14 | 55.08 |
| HORVU4Hr1G057790.4 | Barley | plastid | 52.29 | 53.4 |
| Zm00001d032274_P001 | Maize | plastid | 49.11 | 53.23 |
| TraesCS4B01G199800.1 | Wheat | plastid | 52.29 | 53.08 |
| TraesCS4D01G200800.1 | Wheat | plastid | 52.19 | 53.03 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 52.29 | 52.49 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 14.41 | 44.75 |
| KRH13324 | Soybean | cytosol | 5.07 | 38.93 |
| KRG92279 | Soybean | cytosol | 38.17 | 37.94 |
| KRH34531 | Soybean | cytosol | 38.07 | 37.62 |
| KRG90363 | Soybean | nucleus | 37.08 | 36.68 |
| KRH33633 | Soybean | nucleus | 36.58 | 36.18 |
| KRH08629 | Soybean | cytosol | 37.28 | 34.22 |
| KRH70255 | Soybean | plastid | 36.58 | 33.76 |
| KRH20669 | Soybean | endoplasmic reticulum | 30.12 | 27.5 |
| KRH13315 | Soybean | cytosol, endoplasmic reticulum, nucleus | 29.92 | 27.26 |
Protein Annotations
| EMBL:ACUP02003433 | EnsemblPlants:KRH52752 | EnsemblPlantsGene:GLYMA_06G086000 | EntrezGene:100796233 | InterPro:DUF810 | InterPro:IPR014770 |
| InterPro:IPR014772 | InterPro:Munc13_1 | InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF15 | PFAM:PF05664 |
| PFscan:PS51258 | PFscan:PS51259 | ProteinID:KRH52752 | ProteinID:KRH52752.1 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI000294C94E | UniProt:I1K9E0 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr6:+:6631342..6636582
Molecular Weight (calculated)
112018.0 Da
IEP (calculated)
8.240
GRAVY (calculated)
-0.250
Length
1006 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYVVHTLDSL FFSLLLFFLS HATMAHLFRD LSLGHSKRDS TPPPPIMPPK PSAVIAADDL PSPLGQLAAS LSDSDLALTA YEIFVAACRT SSGKPLSSAA
0101: NHSSTNSPSQ NSPNSPALQR SITSTAASKV KKAFGLKSPG SASRKSPGSG SGQGKPKRPL TVGELMRNQM RVSEAMDSRV RRALLRISAG QVGRRIESVV
0201: VPLELLQQLK ASDFTDHQEY DDWQKRTLKV LEAGLILHPH MPLDKSNSAA QRLRQIVHAA LDKPIETGKN TESMQVLRSA VMSLANRSYE GSYADSCHWA
0301: DGIPLNLRLY EMLLQSCFDA NDESSIIEEF DELMEQIKKT WAILGLNQTL HNLCFTWVLF HRFVVTGQLD LDLLSAADGQ LTEVAKDAKT TKDAEYSKVL
0401: SSTLTSILGW AEKRLLAYHE TFDRGNVETM QGIVSLGVAA AKILVEDISN EYRRRRRNEV NVARERIETY IRSSLRTAFA QIMEKADSSR RASKNQPNAL
0501: PGLVILAKDV GSLAVNEKQV FSPILKRWHP LAAGLAVATL HACYGNELKQ FISGITELTP DAVQVLRAAD QLEKDLVQIA VEDSVESEDG GKAIIREMPP
0601: YEAEGAIANL VKIWIKTRID RLKEWVDRNL QQELWSAQAN QEGYAPSSVE VLRIINETLD AFFQLPIPMH PVLLPEVMNG LDRCLQYYVI KAKSGCGSRN
0701: TFLPTMPALT RCTIGSKFQG FGKKKEKSPN PQKRNPQVAT NGDSSSGIPQ LCVRINTLQW ILGEFDVLEK RIITLLRNSE SAHVEDFSNG LAKKFELSPA
0801: ACLEGIQQLC EAAAYRIVFH DLSQVLWDGL YVGDPASSRI EPCLQELERK LMFISDTVHE RIRTRIITEI MRASFDGFLL VLLAGGPSRA FTRKDSQIIE
0901: DDFKFLKELF WANGDGLPSE LIDKFSTTAR SILPLFRTDT ETLIEQFRRL TMETYKSSAR SKLPLPPTSG QWNPSEPNTL LRVLCYRNDE SASKFLKKAY
1001: DLPKKL
0101: NHSSTNSPSQ NSPNSPALQR SITSTAASKV KKAFGLKSPG SASRKSPGSG SGQGKPKRPL TVGELMRNQM RVSEAMDSRV RRALLRISAG QVGRRIESVV
0201: VPLELLQQLK ASDFTDHQEY DDWQKRTLKV LEAGLILHPH MPLDKSNSAA QRLRQIVHAA LDKPIETGKN TESMQVLRSA VMSLANRSYE GSYADSCHWA
0301: DGIPLNLRLY EMLLQSCFDA NDESSIIEEF DELMEQIKKT WAILGLNQTL HNLCFTWVLF HRFVVTGQLD LDLLSAADGQ LTEVAKDAKT TKDAEYSKVL
0401: SSTLTSILGW AEKRLLAYHE TFDRGNVETM QGIVSLGVAA AKILVEDISN EYRRRRRNEV NVARERIETY IRSSLRTAFA QIMEKADSSR RASKNQPNAL
0501: PGLVILAKDV GSLAVNEKQV FSPILKRWHP LAAGLAVATL HACYGNELKQ FISGITELTP DAVQVLRAAD QLEKDLVQIA VEDSVESEDG GKAIIREMPP
0601: YEAEGAIANL VKIWIKTRID RLKEWVDRNL QQELWSAQAN QEGYAPSSVE VLRIINETLD AFFQLPIPMH PVLLPEVMNG LDRCLQYYVI KAKSGCGSRN
0701: TFLPTMPALT RCTIGSKFQG FGKKKEKSPN PQKRNPQVAT NGDSSSGIPQ LCVRINTLQW ILGEFDVLEK RIITLLRNSE SAHVEDFSNG LAKKFELSPA
0801: ACLEGIQQLC EAAAYRIVFH DLSQVLWDGL YVGDPASSRI EPCLQELERK LMFISDTVHE RIRTRIITEI MRASFDGFLL VLLAGGPSRA FTRKDSQIIE
0901: DDFKFLKELF WANGDGLPSE LIDKFSTTAR SILPLFRTDT ETLIEQFRRL TMETYKSSAR SKLPLPPTSG QWNPSEPNTL LRVLCYRNDE SASKFLKKAY
1001: DLPKKL
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.