Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G200800.1 | Wheat | plastid | 95.81 | 96.97 |
| TraesCS4B01G199800.1 | Wheat | plastid | 95.61 | 96.67 |
| HORVU4Hr1G057790.4 | Barley | plastid | 92.61 | 94.21 |
| Os08t0390100-01 | Rice | cytosol, plastid | 46.01 | 68.5 |
| OQU80385 | Sorghum | cytosol | 55.39 | 66.87 |
| TraesCS5A01G187000.1 | Wheat | mitochondrion, plastid | 64.37 | 65.88 |
| Zm00001d032274_P001 | Maize | plastid | 59.58 | 64.33 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 54.39 | 61.65 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 52.69 | 60.34 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 47.7 | 59.97 |
| VIT_11s0016g03330.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 48.5 | 58.13 |
| KRH62073 | Soybean | cytosol, peroxisome | 28.64 | 54.67 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 54.39 | 54.61 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 54.99 | 54.61 |
| Bra039035.1-P | Field mustard | cytosol | 51.7 | 54.41 |
| CDY40469 | Canola | cytosol | 51.6 | 54.36 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 53.99 | 54.1 |
| CDY35919 | Canola | cytosol | 51.4 | 54.1 |
| AT2G20010.2 | Thale cress | nucleus | 51.3 | 53.99 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 50.5 | 53.6 |
| AT2G25800.1 | Thale cress | plastid | 52.4 | 53.19 |
| CDY35337 | Canola | cytosol | 52.1 | 53.16 |
| Bra034270.1-P | Field mustard | cytosol | 52.59 | 53.07 |
| CDX77008 | Canola | cytosol | 52.1 | 52.67 |
| KRH52752 | Soybean | nucleus | 52.49 | 52.29 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 23.65 | 51.41 |
| KRH74278 | Soybean | cytosol | 49.1 | 51.36 |
| KRH07260 | Soybean | cytosol | 48.7 | 51.31 |
| KRH60226 | Soybean | cytosol | 28.84 | 50.79 |
| PGSC0003DMT400070575 | Potato | cytosol | 46.91 | 49.42 |
| Solyc05g018180.2.1 | Tomato | cytosol, nucleus | 46.21 | 48.53 |
| KRH41514 | Soybean | cytosol | 36.93 | 46.95 |
| KRH60225 | Soybean | cytosol | 17.17 | 45.87 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 12.67 | 39.2 |
| TraesCS1A01G150700.1 | Wheat | cytosol | 31.44 | 31.79 |
| TraesCS5A01G507900.1 | Wheat | mitochondrion | 30.14 | 29.32 |
| TraesCS1A01G052200.3 | Wheat | cytosol, mitochondrion, nucleus | 25.95 | 23.51 |
| TraesCS2A01G401500.1 | Wheat | cytosol | 22.06 | 19.45 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G104100.2 | EnsemblPlantsGene:TraesCS4A01G104100 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF4 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:117693391..117698577
Molecular Weight (calculated)
110173.0 Da
IEP (calculated)
8.534
GRAVY (calculated)
-0.244
Length
1002 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTINKEEKKA ESMGSMARLL PDSRSASASA SWTSSLSSDL ATAAATAATA TSSSAMPLAA PFPGLGVPLS DADLRTTAYE VLVAASRATG GRPLIYIPQS
0101: APSSASARST SSTSTSTSSS SSSSGLQRSR TSTAASKVKR SLGLSPSASS KAGTEAPRRP ETVMELVRVN LRVTEQADSR IRRGLLRIAA GQLGRRAESM
0201: ILPLEFLQRS KASDFPDPHE YEAWQFRNLK LLEAGLLVHP LIPLSKSDIY AQTLQEIISR AYDKSLKTEK NLESMQELSS AVKSLAGRSL GGISDECHWA
0301: DGFPFNLHIY QMLVEACFDC ENCTVVDEID EVMGLLKKTW VILGINQMLH NLCFTWALFN HFATSDQVDM ELLSAAENQL SVVVKDAKTT EDPDYCDILI
0401: SILSSITGWT EKRLLAYHET FNASNIVSMQ GIVAIGVSAA KILLEDISQK YPGKRKQKTD VVRGKIETYI RSSLRTAFAQ RMDEADSKRS SRNPVPVLAI
0501: LAKDISDLAS KEKNIYSPIL KKWHPLASGV AVTTLHSCFG NELKQFMVGR TKFTPDTAQV LNAADKLEKN LVNIAVEDFL DSDDGGKSLI RQMPPYEAEN
0601: AISALVKGWM KERVDKLKEW VDQSLQQETW NPKANRQSFA PSSMEMLRMV DEILDAFFQL PISMHSTLIS DLTAGLDGIL QYYVSKAKAC HGTESTATPQ
0701: LPHLTRCDVG SKLFKKKEKP HALLNRGSQV GSSTGKSEGC DLSELCVQIN TFHYIRTEVE NLKKKAKKCL RNSELSQDGI GTTDGMNIKF ELSQASCQDG
0801: IRQLCDATAH KVVFSYLSHV LLDMLYVGGA ASNRVEPLLR ELHSTLGVIS GIMRNEPRDH LITALMKASF DGFLLVLLAG GPTRAFTLQD AQIIENDFRA
0901: LRGLYLANGD GLPHELVDKA SSEVKSVLPL LRTDTESLIQ RFKQVITERQ GSPTKSSFPK PPRVPAQWSA NDPNTILRVL CYRYDEAATK FLKKTYKFPK
1001: KL
0101: APSSASARST SSTSTSTSSS SSSSGLQRSR TSTAASKVKR SLGLSPSASS KAGTEAPRRP ETVMELVRVN LRVTEQADSR IRRGLLRIAA GQLGRRAESM
0201: ILPLEFLQRS KASDFPDPHE YEAWQFRNLK LLEAGLLVHP LIPLSKSDIY AQTLQEIISR AYDKSLKTEK NLESMQELSS AVKSLAGRSL GGISDECHWA
0301: DGFPFNLHIY QMLVEACFDC ENCTVVDEID EVMGLLKKTW VILGINQMLH NLCFTWALFN HFATSDQVDM ELLSAAENQL SVVVKDAKTT EDPDYCDILI
0401: SILSSITGWT EKRLLAYHET FNASNIVSMQ GIVAIGVSAA KILLEDISQK YPGKRKQKTD VVRGKIETYI RSSLRTAFAQ RMDEADSKRS SRNPVPVLAI
0501: LAKDISDLAS KEKNIYSPIL KKWHPLASGV AVTTLHSCFG NELKQFMVGR TKFTPDTAQV LNAADKLEKN LVNIAVEDFL DSDDGGKSLI RQMPPYEAEN
0601: AISALVKGWM KERVDKLKEW VDQSLQQETW NPKANRQSFA PSSMEMLRMV DEILDAFFQL PISMHSTLIS DLTAGLDGIL QYYVSKAKAC HGTESTATPQ
0701: LPHLTRCDVG SKLFKKKEKP HALLNRGSQV GSSTGKSEGC DLSELCVQIN TFHYIRTEVE NLKKKAKKCL RNSELSQDGI GTTDGMNIKF ELSQASCQDG
0801: IRQLCDATAH KVVFSYLSHV LLDMLYVGGA ASNRVEPLLR ELHSTLGVIS GIMRNEPRDH LITALMKASF DGFLLVLLAG GPTRAFTLQD AQIIENDFRA
0901: LRGLYLANGD GLPHELVDKA SSEVKSVLPL LRTDTESLIQ RFKQVITERQ GSPTKSSFPK PPRVPAQWSA NDPNTILRVL CYRYDEAATK FLKKTYKFPK
1001: KL
001: MESLPSPFGD PAPNLSNSEL RETAYEILVA ACRSTGSRPL TYIPQSPKSD RSNGLTTASL SPSPSLHRSL TSTAASKVKK ALGMKKRIGD GDGGAGESSS
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT
Arabidopsis Description
Gls protein (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q9SL80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.