CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35919	Canola	cytosol	98.63	98.53
AT2G20010.2	Thale cress	nucleus	90.96	90.86
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	57.1	64.95
KRH60226	Soybean	cytosol	36.07	60.28
KRH74278	Soybean	cytosol	60.25	59.81
KRH07260	Soybean	cytosol	59.62	59.62
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	55.2	59.39
GSMUA_Achr4P08290_001	Banana	cytosol	48.37	57.72
CDY35337	Canola	cytosol	59.41	57.54
GSMUA_Achr6P26320_001	Banana	cytosol	52.89	57.49
Os09t0346700-01	Rice	plasma membrane	59.2	57.16
CDX77008	Canola	cytosol	59.52	57.11
PGSC0003DMT400070575	Potato	cytosol	57.1	57.1
EER98780	Sorghum	plastid	59.1	56.88
Zm00001d005638_P001	Maize	plastid	58.68	56.82
Zm00001d020178_P002	Maize	plastid	58.57	56.72
Solyc05g018180.2.1	Tomato	cytosol, nucleus	56.68	56.5
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	57.83	56.18
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	57.73	56.08
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	57.62	55.98
KRH41514	Soybean	cytosol	46.37	55.96
KRH60225	Soybean	cytosol	21.66	54.93
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	52.37	52.75
HORVU4Hr1G057790.4	Barley	plastid	54.36	52.49
OQU80385	Sorghum	cytosol	45.22	51.81
TraesCS4D01G200800.1	Wheat	plastid	53.84	51.72
TraesCS4B01G199800.1	Wheat	plastid	53.84	51.66
TraesCS4A01G104100.2	Wheat	cytosol	54.36	51.6
HORVU5Hr1G041860.5	Barley	plastid	53.0	51.27
Os08t0390100-01	Rice	cytosol, plastid	36.28	51.26
Zm00001d032274_P001	Maize	plastid	49.0	50.22
CDY37722	Canola	mitochondrion	35.86	37.35
CDY53192	Canola	cytosol	37.64	36.87
CDY23738	Canola	cytosol	38.49	36.71
CDY59176	Canola	cytosol	37.43	36.66
CDX84688	Canola	cytosol	37.43	35.81
CDX79528	Canola	cytosol	37.12	35.55
CDY18234	Canola	cytosol	37.54	34.83
CDX89822	Canola	cytosol	37.43	34.73
CDX69997	Canola	cytosol, peroxisome, plastid	29.34	25.86
CDX99020	Canola	cytosol, peroxisome, plastid	29.44	25.76
CDY59387	Canola	cytosol	14.41	22.13
CDX86760	Canola	cytosol	23.87	20.29

Protein Annotations

EnsemblPlants:CDY40469	EnsemblPlantsGene:GSBRNA2T00069706001	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772	InterPro:Munc13_1
InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664	PFscan:PS51258	PFscan:PS51259
ProteinID:CDY40469	ProteinID:CDY40469.1	SEG:seg	UniParc:UPI0004EE92D2	UniProt:A0A078HT64	MapMan:35.1

Description

BnaC07g00030DBnaC07g00030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT64]

Coordinates

chrLK032471:-:67634..71207

Molecular Weight (calculated)

105863.0 Da

IEP (calculated)

7.798

GRAVY (calculated)

-0.247

Length

951 amino acids

Sequence
(BLAST)

001: MESLPSPFGD PAPNLSDSEL RETAYEILVA ACRTTGSRPL TFIPQSPKSD RSNGAASLSA SPSLHRSLTS TAASRVKKAL GMKKRGGGGD VTEGESSGQP
101: DRVKKSVTVG ELVRVQMRIS EQIDSRIRRA LLRIASGQLG RRVETMVLPL ELLQQLKATD FPDHEEYISW QRRNLKLLEA GLIVHPHVPL SKSDKSVQQL
201: KQVIRTGLER PLDTGKITGE SQNLRSVVMS LATRSNNDGI GPDTCHWADG FPLNLRIYQM LLESCFDVND ELSVVEEVDE VLELIKKTWP VLGMNQMVHN
301: VCFLWVLFNR YVATGQVEND LLVAAHNLIL EVESEAKETN DPKYSKISSS VLSLILDWAE KRLLAYHDTF NIDNVETLET TVSLGISVAK VLGEDASSEY
401: RRKKKNVDSG RDRVDTYIRS SLRMAFSQTK KMVEHSKRSK SRQSSTSNLP ALATLAEDIG HLAFNEKAIF SPILKNWHPL AAGVAAATLH SCYGTELKKF
501: VSGITELTPD AIRVLTAADK LEKDLVQIAV QDAVDSDDGG KSVIREMPPF EAEVVIGNLV KSWIKTRVDR LKEWIDRNLQ QEAWNPKLNK LGIAPSSVDV
601: LRMVDETLEA FFLLPILLHT VLLPELTLGL DKCMQHYVSK AKSSCGSRNT FLPALPALTR CTVGSRLHGV FKKKEKPMAA SNRRKSQIGT SNDSAEILQF
701: CCRINTLHYI RTEIESSGRK TLNRLPESDI AAFDGKAKIF EQSIGYCSKG VQQLSEATAY KIVFHDLSNV LWDGLYVGEV SSSRVESFLQ ELERCLEIIS
801: SSVHDRVRTR VISDIMRASF DGFLLVLLAG GPSRCFTVQD SDAVDEDFKF LCDLFWSNGD GLPLDLIEKV STTVKSILPL LRTDTESLIE RFKAVCLENH
901: GSDRGKLPLP PTSGPWSPTE ANTLLRVLCY RYDESATKFL KRTYNLPRKL T

Best Arabidopsis Sequence Match ( AT2G20010.2 )
(BLAST)

001: MESLPSPFGD PAPNLSNSEL RETAYEILVA ACRSTGSRPL TYIPQSPKSD RSNGLTTASL SPSPSLHRSL TSTAASKVKK ALGMKKRIGD GDGGAGESSS
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT

Arabidopsis Description

Gls protein (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q9SL80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.