Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039035.1-P | Field mustard | cytosol | 90.97 | 90.97 |
| CDY40469 | Canola | cytosol | 90.86 | 90.96 |
| CDY35919 | Canola | cytosol | 90.86 | 90.86 |
| VIT_11s0016g03330.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 58.19 | 66.27 |
| KRH74278 | Soybean | cytosol | 61.55 | 61.17 |
| KRH07260 | Soybean | cytosol | 61.03 | 61.09 |
| KRH60226 | Soybean | cytosol | 35.5 | 59.4 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 54.83 | 59.05 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 48.95 | 58.47 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 53.15 | 57.83 |
| Os09t0346700-01 | Rice | plasma membrane | 59.77 | 57.77 |
| PGSC0003DMT400070575 | Potato | cytosol | 57.67 | 57.73 |
| AT2G25800.1 | Thale cress | plastid | 59.66 | 57.55 |
| Solyc05g018180.2.1 | Tomato | cytosol, nucleus | 57.25 | 57.13 |
| EER98780 | Sorghum | plastid | 59.24 | 57.09 |
| Zm00001d005638_P001 | Maize | plastid | 58.72 | 56.92 |
| Zm00001d020178_P002 | Maize | plastid | 58.72 | 56.92 |
| KRH41514 | Soybean | cytosol | 46.95 | 56.73 |
| KRH60225 | Soybean | cytosol | 22.27 | 56.53 |
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 57.98 | 56.38 |
| TraesCS5B01G185400.1 | Wheat | mitochondrion, plastid | 57.88 | 56.28 |
| TraesCS5A01G187000.1 | Wheat | mitochondrion, plastid | 57.67 | 56.08 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 52.52 | 52.97 |
| HORVU4Hr1G057790.4 | Barley | plastid | 53.78 | 51.98 |
| OQU80385 | Sorghum | cytosol | 44.96 | 51.57 |
| TraesCS4D01G200800.1 | Wheat | plastid | 53.47 | 51.41 |
| TraesCS4B01G199800.1 | Wheat | plastid | 53.47 | 51.36 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 53.99 | 51.3 |
| HORVU5Hr1G041860.5 | Barley | plastid | 52.94 | 51.27 |
| Os08t0390100-01 | Rice | cytosol, plastid | 35.71 | 50.52 |
| Zm00001d032274_P001 | Maize | plastid | 49.16 | 50.43 |
| AT2G33420.1 | Thale cress | cytosol | 38.45 | 35.23 |
| AT1G04470.1 | Thale cress | cytosol | 38.13 | 35.07 |
| AT5G06970.1 | Thale cress | cytosol | 29.1 | 25.16 |
| AT4G11670.2 | Thale cress | cytosol | 23.53 | 19.0 |
Protein Annotations
| MapMan:35.1 | EntrezGene:816520 | ProteinID:AAD24395.1 | ProteinID:AEC06954.1 | ProteinID:AEC06955.1 | EMBL:AK228728 |
| ArrayExpress:AT2G20010 | EnsemblPlantsGene:AT2G20010 | RefSeq:AT2G20010 | TAIR:AT2G20010 | RefSeq:AT2G20010-TAIR-G | EnsemblPlants:AT2G20010.2 |
| TAIR:AT2G20010.2 | Unigene:At.47508 | InterPro:DUF810 | GO:GO:0008150 | InterPro:IPR014770 | InterPro:IPR014772 |
| InterPro:Munc13_1 | InterPro:Munc13_dom-2 | RefSeq:NP_001077922.1 | RefSeq:NP_179591.2 | PFAM:PF05664 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51258 |
| PFscan:PS51259 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF15 | UniProt:Q9SL80 | UniParc:UPI000009F197 | SEG:seg |
Description
Gls protein (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q9SL80]
Coordinates
chr2:-:8637663..8641631
Molecular Weight (calculated)
106357.0 Da
IEP (calculated)
7.644
GRAVY (calculated)
-0.235
Length
952 amino acids
Sequence
(BLAST)
(BLAST)
001: MESLPSPFGD PAPNLSNSEL RETAYEILVA ACRSTGSRPL TYIPQSPKSD RSNGLTTASL SPSPSLHRSL TSTAASKVKK ALGMKKRIGD GDGGAGESSS
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.