Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P08290_001 | Banana | cytosol | 58.69 | 69.51 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 64.41 | 68.78 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 61.86 | 66.74 |
| GSMUA_Achr9P06130_001 | Banana | nucleus | 11.86 | 61.54 |
| VIT_11s0016g03330.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 52.22 | 58.97 |
| Os09t0346700-01 | Rice | plasma membrane | 60.28 | 57.77 |
| Zm00001d005638_P001 | Maize | plastid | 59.43 | 57.13 |
| Zm00001d020178_P002 | Maize | plastid | 59.11 | 56.82 |
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 58.9 | 56.79 |
| TraesCS5A01G187000.1 | Wheat | mitochondrion, plastid | 58.9 | 56.79 |
| TraesCS5B01G185400.1 | Wheat | mitochondrion, plastid | 58.79 | 56.69 |
| EER98780 | Sorghum | plastid | 59.0 | 56.38 |
| Os08t0390100-01 | Rice | cytosol, plastid | 38.98 | 54.68 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 57.94 | 54.21 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 26.38 | 54.01 |
| OQU80385 | Sorghum | cytosol | 47.46 | 53.98 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 56.04 | 53.01 |
| KRH62073 | Soybean | cytosol, peroxisome | 29.45 | 52.95 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 56.04 | 52.9 |
| KRH60226 | Soybean | cytosol | 31.89 | 52.9 |
| HORVU5Hr1G041860.5 | Barley | plastid | 55.08 | 52.9 |
| KRH52752 | Soybean | nucleus | 56.25 | 52.78 |
| CDY35337 | Canola | cytosol | 54.87 | 52.75 |
| AT2G20010.2 | Thale cress | nucleus | 52.97 | 52.52 |
| AT2G25800.1 | Thale cress | plastid | 54.77 | 52.38 |
| Bra034270.1-P | Field mustard | cytosol | 55.08 | 52.37 |
| CDY40469 | Canola | cytosol | 52.75 | 52.37 |
| Bra039035.1-P | Field mustard | cytosol | 52.75 | 52.31 |
| CDY35919 | Canola | cytosol | 52.65 | 52.21 |
| KRH74278 | Soybean | cytosol | 52.97 | 52.19 |
| CDX77008 | Canola | cytosol | 54.66 | 52.07 |
| Zm00001d032274_P001 | Maize | plastid | 51.06 | 51.94 |
| KRH07260 | Soybean | cytosol | 51.69 | 51.31 |
| HORVU4Hr1G057790.4 | Barley | plastid | 53.5 | 51.27 |
| TraesCS4D01G200800.1 | Wheat | plastid | 53.28 | 50.81 |
| TraesCS4B01G199800.1 | Wheat | plastid | 53.28 | 50.76 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 53.6 | 50.5 |
| PGSC0003DMT400070575 | Potato | cytosol | 50.21 | 49.84 |
| Solyc05g018180.2.1 | Tomato | cytosol, nucleus | 49.58 | 49.06 |
| KRH41514 | Soybean | cytosol | 40.36 | 48.35 |
| KRH60225 | Soybean | cytosol | 17.48 | 44.0 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 14.19 | 41.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.79 | 36.46 |
| GSMUA_Achr1P16870_001 | Banana | cytosol | 34.64 | 36.17 |
| GSMUA_Achr4P29190_001 | Banana | cytosol | 31.99 | 34.71 |
| GSMUA_Achr1P10950_001 | Banana | cytosol | 33.37 | 33.8 |
| GSMUA_Achr1P03530_001 | Banana | cytosol | 31.14 | 33.22 |
| GSMUA_Achr2P01140_001 | Banana | cytosol | 20.97 | 24.32 |
| GSMUA_Achr2P01130_001 | Banana | extracellular, golgi | 7.84 | 23.05 |
| GSMUA_Achr11P... | Banana | cytosol | 23.41 | 19.02 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P15490_001 | EnsemblPlants:GSMUA_Achr4T15490_001 | EnsemblPlantsGene:GSMUA_Achr4G15490_001 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 |
| InterPro:Munc13_1 | InterPro:Munc13_dom-2 | ncoils:Coil | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF15 | PFAM:PF05664 |
| PFscan:PS51258 | PFscan:PS51259 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294A0A9 | UniProt:M0SP64 |
| MapMan:35.1 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G15490_001]
Coordinates
chr4:-:11688878..11695019
Molecular Weight (calculated)
105861.0 Da
IEP (calculated)
5.861
GRAVY (calculated)
-0.177
Length
944 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLPVASVA VRSSFSVVGE AFFSTFISFN GITSSTILVF VRVHQLYIGP IIYNKMCFPM YILYGIIMTK VSDGRFMCQL GVLGDFKKEP DGNSSLRFSS
101: GDAMTVATDL PSPFGQLGVF LSDAELRQTA YEIFVAACRA NGGKPLTYTP QSDRTKGSLG QESIPVKSSK KPASVGELMR VQMGISEQLD ARIRRGLLRI
201: AAGNLGKRME SMVLPLEFLQ QFKASDFPDQ QEYKDWQARN LKVLEAGLLL HPLLPLDKSD AASQKLHQIM HGASDGPIET GKNSESMQIL RSAVTSLAYR
301: LLDGIGSDAC HWADGFPLNL HLYQMLLEAC FNNSSEEGST VDEFDEVLEL IKKTWAILGI NQMFHNLCFT WTLFLRFVTT GEVEVGLLIA ADAQLTEVAS
401: DAKATQDPTY SKILSSTLSY IMDWTEKKLF AYHDMFNSSN IELMETVVSF GVTAAKILVE DFSTEYHRKR REETDVARSR IDAYIRSSLR AAFAQKMKQT
501: ASSKLSSEDQ STPLLSILAE EIEELANKEK ELFSPILKKW HPLAAGVAVM TLHSCYGTEL KQFLSGVKEL APDVLQVLRA ADKLEKDLLD IVVEDSVDSD
601: DGGKSLIREM PPYEAESAIA DLVRAWIKSR LDQLKEWLDR TLQQEVWNPR ANKENRSPSS VEILRMVDET LDEYFDLPIP MHAVLLPDLL KGLDRSLQHY
701: ASEAQSGCGA RNDFMPALPE LTRCTVSSKL RKKKDKPQNS TKRRSQLCET TAYRMIFHDL DHVLWNSLYV GEAASSRIDP FLKELDLILE VVLNTVHMRV
801: RHQLITELMK ASFDGLLLVL LAGGPSRGFS CQDSQIIEED FKSLRELYLA DRDGLPEELF DKAAAEVNKV LPLFRTDTET LIEKFKHMIA ETYDPAAKSK
901: YPIPPNPGNW GPTEPSTILH VLCHRNDVAA TKFLKRTYNF PKKL
101: GDAMTVATDL PSPFGQLGVF LSDAELRQTA YEIFVAACRA NGGKPLTYTP QSDRTKGSLG QESIPVKSSK KPASVGELMR VQMGISEQLD ARIRRGLLRI
201: AAGNLGKRME SMVLPLEFLQ QFKASDFPDQ QEYKDWQARN LKVLEAGLLL HPLLPLDKSD AASQKLHQIM HGASDGPIET GKNSESMQIL RSAVTSLAYR
301: LLDGIGSDAC HWADGFPLNL HLYQMLLEAC FNNSSEEGST VDEFDEVLEL IKKTWAILGI NQMFHNLCFT WTLFLRFVTT GEVEVGLLIA ADAQLTEVAS
401: DAKATQDPTY SKILSSTLSY IMDWTEKKLF AYHDMFNSSN IELMETVVSF GVTAAKILVE DFSTEYHRKR REETDVARSR IDAYIRSSLR AAFAQKMKQT
501: ASSKLSSEDQ STPLLSILAE EIEELANKEK ELFSPILKKW HPLAAGVAVM TLHSCYGTEL KQFLSGVKEL APDVLQVLRA ADKLEKDLLD IVVEDSVDSD
601: DGGKSLIREM PPYEAESAIA DLVRAWIKSR LDQLKEWLDR TLQQEVWNPR ANKENRSPSS VEILRMVDET LDEYFDLPIP MHAVLLPDLL KGLDRSLQHY
701: ASEAQSGCGA RNDFMPALPE LTRCTVSSKL RKKKDKPQNS TKRRSQLCET TAYRMIFHDL DHVLWNSLYV GEAASSRIDP FLKELDLILE VVLNTVHMRV
801: RHQLITELMK ASFDGLLLVL LAGGPSRGFS CQDSQIIEED FKSLRELYLA DRDGLPEELF DKAAAEVNKV LPLFRTDTET LIEKFKHMIA ETYDPAAKSK
901: YPIPPNPGNW GPTEPSTILH VLCHRNDVAA TKFLKRTYNF PKKL
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.