Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • nucleus 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77008 Canola cytosol 92.81 92.43
CDY35337 Canola cytosol 91.79 92.26
Bra034270.1-P Field mustard cytosol 92.5 91.94
KRH62073 Soybean cytosol, peroxisome 39.51 74.29
KRH62072 Soybean cytosol, mitochondrion, nucleus 34.35 73.54
Solyc08g066600.2.1 Tomato cytosol, mitochondrion, plastid 74.27 73.45
VIT_04s0008g03350.t01 Wine grape mitochondrion 75.08 73.44
PGSC0003DMT400005705 Potato mitochondrion 74.16 73.2
KRH52752 Soybean nucleus 73.56 72.17
GSMUA_Achr3P16260_001 Banana cytosol, mitochondrion 59.88 66.86
GSMUA_Achr6P26320_001 Banana cytosol 58.26 65.71
GSMUA_Achr4P08290_001 Banana cytosol 51.27 63.49
Os09t0346700-01 Rice plasma membrane 63.32 63.45
Zm00001d020178_P002 Maize plastid 62.72 63.03
Zm00001d005638_P001 Maize plastid 62.41 62.73
EER98780 Sorghum plastid 62.51 62.45
TraesCS5A01G187000.1 Wheat mitochondrion, plastid 61.9 62.41
TraesCS5D01G192300.1 Wheat mitochondrion, plastid 61.9 62.41
TraesCS5B01G185400.1 Wheat mitochondrion, plastid 61.8 62.31
AT2G20010.2 Thale cress nucleus 57.55 59.66
HORVU5Hr1G041860.5 Barley plastid 56.64 56.87
Os08t0390100-01 Rice cytosol, plastid 38.1 55.87
GSMUA_Achr4P15490_001 Banana golgi, plasma membrane 52.38 54.77
OQU80385 Sorghum cytosol 45.59 54.22
HORVU4Hr1G057790.4 Barley plastid 53.09 53.2
TraesCS4B01G199800.1 Wheat plastid 53.09 52.88
TraesCS4D01G200800.1 Wheat plastid 52.99 52.83
TraesCS4A01G104100.2 Wheat cytosol 53.19 52.4
Zm00001d032274_P001 Maize plastid 48.73 51.83
Solyc05g041240.1.1 Tomato endoplasmic reticulum, golgi 16.21 49.38
AT2G33420.1 Thale cress cytosol 39.21 37.25
AT1G04470.1 Thale cress cytosol 38.8 37.0
AT5G06970.1 Thale cress cytosol 29.18 26.16
AT4G11670.2 Thale cress cytosol 22.19 18.58
Protein Annotations
MapMan:35.1EntrezGene:817122UniProt:A0A178VWV5ProteinID:AEC07754.1EMBL:AK228785ArrayExpress:AT2G25800
EnsemblPlantsGene:AT2G25800RefSeq:AT2G25800TAIR:AT2G25800RefSeq:AT2G25800-TAIR-GEnsemblPlants:AT2G25800.1TAIR:AT2G25800.1
Unigene:At.20496InterPro:DUF810GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003746
GO:GO:0005488GO:GO:0006412GO:GO:0006414GO:GO:0008135GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:IPR014770InterPro:IPR014772InterPro:Munc13_1
InterPro:Munc13_dom-2RefSeq:NP_180151.3ProteinID:OAP10358.1PFAM:PF05664PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS51258
PFscan:PS51259PANTHER:PTHR31280PANTHER:PTHR31280:SF15UniProt:Q0WQB7UniParc:UPI0000DB5309SEG:seg
Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
Coordinates
chr2:-:11005775..11009861
Molecular Weight (calculated)
109970.0 Da
IEP (calculated)
8.284
GRAVY (calculated)
-0.308
Length
987 amino acids
Sequence
(BLAST)
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.