Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69997 | Canola | cytosol, peroxisome, plastid | 91.46 | 93.33 |
| Bra009303.1-P | Field mustard | cytosol, peroxisome, plastid | 91.19 | 93.22 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 91.37 | 92.55 |
| KRH13324 | Soybean | cytosol | 9.17 | 77.1 |
| KRH20669 | Soybean | endoplasmic reticulum | 71.48 | 71.42 |
| KRH13315 | Soybean | cytosol, endoplasmic reticulum, nucleus | 71.57 | 71.38 |
| VIT_13s0084g00630.t01 | Wine grape | cytosol | 72.12 | 70.52 |
| Solyc01g096540.2.1 | Tomato | cytosol, plastid | 69.85 | 69.28 |
| GSMUA_Achr2P01130_001 | Banana | extracellular, golgi | 19.44 | 66.67 |
| Os03t0683700-02 | Rice | plasma membrane | 15.44 | 65.38 |
| GSMUA_Achr2P01140_001 | Banana | cytosol | 48.14 | 65.11 |
| KXG21868 | Sorghum | cytosol | 65.4 | 65.1 |
| HORVU2Hr1G041780.2 | Barley | cytosol | 31.43 | 64.31 |
| TraesCS2D01G215400.1 | Wheat | nucleus | 64.03 | 63.69 |
| TraesCS1A01G052200.3 | Wheat | cytosol, mitochondrion, nucleus | 63.76 | 63.47 |
| HORVU2Hr1G041800.16 | Barley | cytosol | 24.89 | 63.28 |
| TraesCS1B01G069300.2 | Wheat | nucleus | 63.76 | 62.4 |
| Zm00001d037867_P001 | Maize | cytosol | 65.21 | 61.42 |
| PGSC0003DMT400004282 | Potato | extracellular | 10.08 | 42.69 |
| Solyc02g071830.1.1 | Tomato | endoplasmic reticulum, extracellular | 11.9 | 36.49 |
| AT4G11670.2 | Thale cress | cytosol | 32.52 | 30.36 |
| AT2G25800.1 | Thale cress | plastid | 26.16 | 29.18 |
| AT2G20010.2 | Thale cress | nucleus | 25.16 | 29.1 |
| AT1G04470.1 | Thale cress | cytosol | 24.7 | 26.28 |
| AT2G33420.1 | Thale cress | cytosol | 24.07 | 25.51 |
Protein Annotations
| MapMan:21.1.1.3.2 | EntrezGene:830588 | ProteinID:AED91091.1 | ArrayExpress:AT5G06970 | EnsemblPlantsGene:AT5G06970 | RefSeq:AT5G06970 |
| TAIR:AT5G06970 | RefSeq:AT5G06970-TAIR-G | EnsemblPlants:AT5G06970.1 | TAIR:AT5G06970.1 | EMBL:AY090450 | Unigene:At.44023 |
| ProteinID:BAB11155.1 | EMBL:BT002724 | InterPro:DUF810 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010118 |
| GO:GO:0016020 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 | InterPro:Munc13_dom-2 | RefSeq:NP_196314.2 |
| PFAM:PF05664 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51258 | PFscan:PS51259 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF2 | UniProt:Q8RX56 |
| UniParc:UPI00000AC625 | SEG:seg | : | : | : | : |
Description
PATROL1Protein unc-13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RX56]
Coordinates
chr5:-:2157970..2166511
Molecular Weight (calculated)
124530.0 Da
IEP (calculated)
6.153
GRAVY (calculated)
-0.287
Length
1101 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEENAVEIL QRYRRDRRKL LDFMLAGSLI KKVIMPPGAV TLDDVDLDQV SVDYVINCAK KGGMLELAEA IRDYHDHIGL PYMNSVGTAD EFFLATIPES
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.