Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53192 | Canola | cytosol | 84.93 | 90.53 |
| CDY59176 | Canola | cytosol | 84.25 | 89.8 |
| Bra032507.1-P | Field mustard | mitochondrion, plastid | 78.94 | 88.42 |
| CDY18234 | Canola | cytosol | 86.96 | 87.8 |
| CDX89822 | Canola | cytosol | 86.86 | 87.71 |
| Bra015318.1-P | Field mustard | cytosol | 87.73 | 87.56 |
| AT2G33420.1 | Thale cress | cytosol | 83.77 | 83.45 |
| VIT_05s0049g01560.t01 | Wine grape | nucleus | 66.57 | 67.55 |
| KRG92279 | Soybean | cytosol | 63.57 | 65.02 |
| KRG90363 | Soybean | nucleus | 63.38 | 64.5 |
| KRH34531 | Soybean | cytosol | 62.9 | 63.95 |
| KRH33633 | Soybean | nucleus | 62.71 | 63.82 |
| PGSC0003DMT400044198 | Potato | cytosol | 61.84 | 62.81 |
| Solyc09g090480.2.1 | Tomato | cytosol | 61.55 | 62.51 |
| Solyc03g005630.2.1 | Tomato | cytosol | 59.52 | 60.16 |
| PGSC0003DMT400034999 | Potato | cytosol | 59.71 | 60.12 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.92 | 56.69 |
| GSMUA_Achr1P10950_001 | Banana | cytosol | 50.14 | 55.69 |
| KRH70255 | Soybean | plastid | 58.26 | 55.32 |
| KRH08629 | Soybean | cytosol | 58.07 | 54.84 |
| GSMUA_Achr4P29190_001 | Banana | cytosol | 46.09 | 54.83 |
| GSMUA_Achr1P03530_001 | Banana | cytosol | 46.86 | 54.8 |
| GSMUA_Achr1P16870_001 | Banana | cytosol | 47.25 | 54.09 |
| Os10t0471000-01 | Rice | cytosol, mitochondrion | 17.1 | 53.64 |
| OQU91659 | Sorghum | cytosol | 37.2 | 50.86 |
| EER92892 | Sorghum | mitochondrion | 51.21 | 50.57 |
| TraesCS1B01G168300.2 | Wheat | cytosol | 47.34 | 50.2 |
| TraesCS4B01G338200.1 | Wheat | mitochondrion | 49.37 | 49.85 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 47.34 | 49.7 |
| Zm00001d032737_P001 | Maize | cytosol | 48.02 | 49.65 |
| TraesCS4D01G334500.1 | Wheat | mitochondrion | 49.28 | 49.56 |
| TraesCS1D01G147700.1 | Wheat | mitochondrion | 47.44 | 49.55 |
| TraesCS1A01G150700.1 | Wheat | cytosol | 47.34 | 49.45 |
| Zm00001d027590_P001 | Maize | mitochondrion | 49.86 | 49.33 |
| Os03t0138600-01 | Rice | nucleus, plasma membrane | 47.34 | 49.0 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 48.7 | 48.93 |
| TraesCS5A01G507900.1 | Wheat | mitochondrion | 48.6 | 48.84 |
| Zm00001d010939_P004 | Maize | mitochondrion | 42.22 | 43.18 |
| EES18963 | Sorghum | mitochondrion | 42.32 | 41.83 |
| AT2G25800.1 | Thale cress | plastid | 37.0 | 38.8 |
| AT2G20010.2 | Thale cress | nucleus | 35.07 | 38.13 |
| AT5G06970.1 | Thale cress | cytosol | 26.28 | 24.7 |
| AT4G11670.2 | Thale cress | cytosol | 21.06 | 18.49 |
Protein Annotations
| MapMan:35.1 | EntrezGene:839512 | ProteinID:AAB70427.1 | ProteinID:AEE27701.1 | ArrayExpress:AT1G04470 | EnsemblPlantsGene:AT1G04470 |
| RefSeq:AT1G04470 | TAIR:AT1G04470 | RefSeq:AT1G04470-TAIR-G | EnsemblPlants:AT1G04470.1 | TAIR:AT1G04470.1 | Unigene:At.42448 |
| ncoils:Coil | InterPro:DUF810 | GO:GO:0008150 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | RefSeq:NP_171941.2 | UniProt:P93812 | PFAM:PF05664 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51258 | PFscan:PS51259 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF1 |
| UniParc:UPI000009F7B0 | SEG:seg | : | : | : | : |
Description
F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
Coordinates
chr1:-:1210924..1214841
Molecular Weight (calculated)
115480.0 Da
IEP (calculated)
6.895
GRAVY (calculated)
-0.274
Length
1035 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.