Factsheet for VIT_05s0049g01560.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53192	Canola	cytosol	65.39	68.69
CDY59176	Canola	cytosol	64.9	68.18
CDY23738	Canola	cytosol	66.27	67.8
CDY37722	Canola	mitochondrion	60.2	67.25
AT2G33420.1	Thale cress	cytosol	68.43	67.18
Bra032507.1-P	Field mustard	mitochondrion, plastid	60.39	66.67
AT1G04470.1	Thale cress	cytosol	67.55	66.57
CDX89822	Canola	cytosol	66.86	66.54
CDY18234	Canola	cytosol	66.76	66.44
CDX79528	Canola	cytosol	64.61	66.36
CDX84688	Canola	cytosol	64.61	66.3
Bra015318.1-P	Field mustard	cytosol	66.96	65.86
Bra021851.1-P	Field mustard	cytosol	66.67	65.64
Bra022939.1-P	Field mustard	cytosol	65.59	64.58
KRG90363	Soybean	nucleus	63.24	63.42
PGSC0003DMT400044198	Potato	cytosol	63.24	63.3
KRG92279	Soybean	cytosol	62.75	63.24
Solyc09g090480.2.1	Tomato	cytosol	62.84	62.9
KRH33633	Soybean	nucleus	62.45	62.64
KRH34531	Soybean	cytosol	62.45	62.57
PGSC0003DMT400034999	Potato	cytosol	62.06	61.58
Solyc03g005630.2.1	Tomato	cytosol	61.67	61.43
GSMUA_Achr4P29190_001	Banana	cytosol	51.27	60.11
GSMUA_AchrUn_...	Banana	cytosol	50.49	58.86
GSMUA_Achr1P03530_001	Banana	cytosol	50.29	57.97
GSMUA_Achr1P10950_001	Banana	cytosol	52.65	57.62
KRH70255	Soybean	plastid	60.49	56.61
Os10t0471000-01	Rice	cytosol, mitochondrion	18.24	56.36
KRH08629	Soybean	cytosol	59.51	55.38
GSMUA_Achr1P16870_001	Banana	cytosol	48.43	54.65
EER92892	Sorghum	mitochondrion	55.29	53.82
OQU91659	Sorghum	cytosol	39.9	53.76
TraesCS4B01G338200.1	Wheat	mitochondrion	52.55	52.29
TraesCS1B01G168300.2	Wheat	cytosol	50.0	52.25
Zm00001d027590_P001	Maize	mitochondrion	53.43	52.1
TraesCS4D01G334500.1	Wheat	mitochondrion	52.55	52.09
TraesCS1D01G147700.1	Wheat	mitochondrion	49.9	51.36
TraesCS5A01G507900.1	Wheat	mitochondrion	51.76	51.26
TraesCS1A01G150700.1	Wheat	cytosol	49.8	51.26
HORVU1Hr1G039810.1	Barley	mitochondrion	49.41	51.12
Os03t0138600-01	Rice	nucleus, plasma membrane	50.1	51.1
Zm00001d032737_P001	Maize	cytosol	50.1	51.05
HORVU4Hr1G083660.3	Barley	mitochondrion	51.47	50.97
Zm00001d010939_P004	Maize	mitochondrion	44.8	45.16
EES18963	Sorghum	mitochondrion	45.2	44.03
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	35.98	43.9
VIT_04s0008g03350.t01	Wine grape	mitochondrion	40.69	41.13
VIT_13s0084g00630.t01	Wine grape	cytosol	27.45	24.87
VIT_02s0025g04160.t01	Wine grape	cytosol	22.45	19.88

Protein Annotations

ArrayExpress:VIT_05s0049g01560	EMBL:FN595496	EnsemblPlants:VIT_05s0049g01560.t01	EnsemblPlantsGene:VIT_05s0049g01560	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772	InterPro:Munc13_1	InterPro:Munc13_dom-2
PANTHER:PTHR31280	PANTHER:PTHR31280:SF1	PFAM:PF05664	PFscan:PS51258	PFscan:PS51259	ProteinID:CCB48608
ProteinID:CCB48608.1	SEG:seg	UniParc:UPI0002108D28	UniProt:F6H8Q9	MapMan:35.1	:

Description

No Description!

Coordinates

chr5:-:8930073..8934179

Molecular Weight (calculated)

114818.0 Da

IEP (calculated)

7.497

GRAVY (calculated)

-0.292

Length

1020 amino acids

Sequence
(BLAST)

0001: MGHHSRRDSL AGNPPSSSSS SSSDHPHPHP HPHHHHFSSL PSLPHHHYHD FDLSWPFAKL DHLDRDDIRE TAYEVFFTAC RSSPGFGGRN ALTFYSSDHS
0101: DGGVGGIGTV AARANGVGMV PTSRIKRALG LKTLKRSPPR LAFTLPAGRT KRPLTSAEIM RQQMRVTEQS DNRLRKTLMR SLVGQMGRRA ETIILPLELL
0201: RHLKPSEFND SHEYHLWQKR QLKILEAGLL DHPSVPLEKS NTFVMRLREI IRASESKPID TGKNSDTMRI LCNSVISLSW RTPNGSPADV CHWADGFPLN
0301: LHLYLALLHS IFDIKDETMV LDEVDELLEL MKKTWSTLAI NKQLHNLCFT WVFFHQYVAT GQTEPDLLCA AFAMLAEVAN DAKKPDRDPN YVKFLSSVLA
0401: SMQAWSEKRL ANYHEYFYKG IVGLMENLLP LVLSATKILD EDVTATVLAG QEREEPTVEV DHAGNRVDYY IRSSLRNAFS KIIEHGNFSA MNVLVEQEAT
0501: EALLQLAKET EDLAVKEKET FSPTLKRWHP IAAGVASVTL HQCYGAVLKQ YLAGVSTLTS DTIRVLQRAG KLEKILVQMV VEDSVDCEDG GKAIVREMVP
0601: YEVDSVTYCL LKKWIGERLE KVKECLERAK ENETWNPKSK TEPYGQSGVE LMKLAKETVE DFFEIPIGIS DDLVHNLAER LEAIFQEYTT FVASCGTKQS
0701: YVLQLPPLTR CNRDSKFIKL WKKATPCSVT IEGVMPSGTN EGHHPRPSTS RGTQRLYIRL NTLHYLLSHI HSLDKTLSLS PRIIPSTRHQ FRNSHRQLGT
0801: SSAYFDLARL SIQAASQHVS EVAAYRLIFL DSNSVFYESL YVDDVANARI RPALRILKQN LTLLGAILTD RAQALAIKEV MKASFEAYLM VLLAGGSSRV
0901: FCRSDHEMIE EDFDSLKRVF CTCGEGLMAE DVVEREAETV EGVVTLMGQN TEQLMEDFSI LACEASGIGV VGAGQRLPMP PTTGRWNRAD PNTILRVLCY
1001: RNDRAANLFL KRTFQLAKRR

Best Arabidopsis Sequence Match ( AT2G33420.1 )
(BLAST)

0001: MTHHHRRESF SVTPSTMGGS VVLCPNTDLL WPFGKLEGLD RDDIRETAYE IFFTACRSSP GFGGRTALTF YSNHNSNDHH GDGGGGIGSG GSTGVGSGFG
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR

Arabidopsis Description

Uncharacterized protein At2g33420 [Source:UniProtKB/TrEMBL;Acc:O22792]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.