Factsheet for Bra022939.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84688	Canola	cytosol	95.66	99.7
CDX79528	Canola	cytosol	94.79	98.89
Bra021851.1-P	Field mustard	cytosol	92.95	92.95
AT2G33420.1	Thale cress	cytosol	91.22	90.95
Bra032507.1-P	Field mustard	mitochondrion, plastid	74.03	83.01
Bra015318.1-P	Field mustard	cytosol	81.37	81.29
VIT_05s0049g01560.t01	Wine grape	nucleus	64.58	65.59
KRG92279	Soybean	cytosol	62.84	64.33
KRG90363	Soybean	nucleus	62.64	63.82
KRH33633	Soybean	nucleus	62.16	63.32
KRH34531	Soybean	cytosol	62.07	63.16
PGSC0003DMT400044198	Potato	cytosol	59.75	60.75
Solyc09g090480.2.1	Tomato	cytosol	59.46	60.45
Solyc03g005630.2.1	Tomato	cytosol	59.07	59.77
PGSC0003DMT400034999	Potato	cytosol	59.17	59.63
GSMUA_AchrUn_...	Banana	cytosol	47.88	56.69
GSMUA_Achr1P10950_001	Banana	cytosol	50.58	56.22
GSMUA_Achr4P29190_001	Banana	cytosol	46.04	54.83
KRH08629	Soybean	cytosol	57.24	54.11
KRH70255	Soybean	plastid	56.85	54.04
GSMUA_Achr1P16870_001	Banana	cytosol	47.01	53.87
Os10t0471000-01	Rice	cytosol, mitochondrion	17.08	53.64
GSMUA_Achr1P03530_001	Banana	cytosol	45.56	53.33
TraesCS1B01G168300.2	Wheat	cytosol	47.3	50.2
OQU91659	Sorghum	cytosol	36.68	50.2
TraesCS4B01G338200.1	Wheat	mitochondrion	49.42	49.95
TraesCS1D01G147700.1	Wheat	mitochondrion	47.59	49.75
TraesCS4D01G334500.1	Wheat	mitochondrion	49.32	49.66
HORVU1Hr1G039810.1	Barley	mitochondrion	47.2	49.59
Zm00001d032737_P001	Maize	cytosol	47.88	49.55
EER92892	Sorghum	mitochondrion	50.1	49.52
TraesCS1A01G150700.1	Wheat	cytosol	47.3	49.45
HORVU4Hr1G083660.3	Barley	mitochondrion	48.94	49.22
TraesCS5A01G507900.1	Wheat	mitochondrion	48.75	49.03
Os03t0138600-01	Rice	nucleus, plasma membrane	47.2	48.9
Zm00001d027590_P001	Maize	mitochondrion	48.84	48.37
Zm00001d010939_P004	Maize	mitochondrion	42.66	43.68
EES18963	Sorghum	mitochondrion	42.66	42.22
Bra034270.1-P	Field mustard	cytosol	37.36	38.97
Bra039035.1-P	Field mustard	cytosol	35.52	38.66
Bra009303.1-P	Field mustard	cytosol, peroxisome, plastid	25.77	24.79
Bra040967.1-P	Field mustard	cytosol	22.2	20.55

Protein Annotations

EnsemblPlants:Bra022939.1	EnsemblPlants:Bra022939.1-P	EnsemblPlantsGene:Bra022939	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772
InterPro:Munc13_1	InterPro:Munc13_dom-2	ncoils:Coil	PANTHER:PTHR31280	PANTHER:PTHR31280:SF1	PFAM:PF05664
PFscan:PS51258	PFscan:PS51259	SEG:seg	UniParc:UPI000253FD2F	UniProt:M4E2D9	MapMan:35.1

Description

AT2G33420 (E=0.0) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04470.1); Has 112 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

Coordinates

chrA03:+:7864429..7868886

Molecular Weight (calculated)

115648.0 Da

IEP (calculated)

8.455

GRAVY (calculated)

-0.308

Length

1036 amino acids

Sequence
(BLAST)

0001: MNHHQRRESF SVTISNMGGG STVVCPNTDL LWPFGKLSGL DGNDIRETAY EIFFTACRSS PGFGGKTALT FYSTHNNNDH HGEGGGAAAT SGGSPGVGSG
0101: SGFGFSGRKE VVTTPTSRVK RALGLKMLKR SPSRRMSTIG ATGGAGTTSL SPGSGSGHVS PGAGFLTVQP SRPRRPLTSA EIMRQQMRVT EQSDSRLRKT
0201: LLRTLVGQTG RRAETIILPL ELLRHLKTSE FGDANEYQVW QRRQLKVLEA GLLLHPSIPL DKTNNNAMRL REIVRQSENK TIDTSKTSDT MRTLCNVVVS
0301: LSWRSTNGNP SDVCHWADGY PLNIHLYVAL LQSIFDVRDE TLVLDEINEL LELMKKTWST LGITRPVHNL CFTWVLFHQY VVTSQMEPDL LGASHAMLAE
0401: VANDAKKLDR EALYVKLLTS TLASMQGWTE KRLLSYHDYF QRGNVGLIEN LLPLALSSSR ILGDDVTISQ GKGDVKLIDY SGDRVDFYIR ASIKTAFSKV
0501: IENTKAKIAA TEEGEEAAAT LLQLAKETEE LALRERECFS PILKRWHSVA AGVASVSLHQ CYGSILMQYL AGRSFISRDT VDVLQTAGKL EKVLVQMVAE
0601: DTEECDDGGK GLVREMVPYE VDSIILRLIR QWIEEKLKGV QECLFRAKET ETWNPKSKSE PYAQSAGEMM KLAKDIIDEF FEIPIGITED LVYDLAEGLE
0701: QLFQEYTTFV ASCGSRQSYI PTLPPLTRCN RDSRFLKLWK RATPCTASGK DFSHTAPPSD GHHPRPSTSR GTQRLYIRLN TLHFLSSHIH SLNKALSLNP
0801: KVLPATRKRY RHRNNNNSSY FDFTYAGIES ACQHVSEVAA YRLIFLDSNS VFYESLYIGD VTNSRIRPAL RVTKQNLTLM SAILADRAQA LAMREVMKSS
0901: FEAFLMVLLA GGYSRVFYRS DHSLIEEDFE NLKRVFCTCG EGLIPEEIVD RDAEIVEGVI QLMSQPTEQL MEDFSIVTCE TSGMGMVGPG HKLPMPPTTG
1001: RWNRSDANTI LRVLCHRNDR VANRFLKKSF QLPKRR

Best Arabidopsis Sequence Match ( AT2G33420.1 )
(BLAST)

0001: MTHHHRRESF SVTPSTMGGS VVLCPNTDLL WPFGKLEGLD RDDIRETAYE IFFTACRSSP GFGGRTALTF YSNHNSNDHH GDGGGGIGSG GSTGVGSGFG
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR

Arabidopsis Description

Uncharacterized protein At2g33420 [Source:UniProtKB/TrEMBL;Acc:O22792]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.