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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53192 Canola cytosol 93.51 88.98
Bra015318.1-P Field mustard cytosol 90.26 80.42
AT1G04470.1 Thale cress cytosol 88.42 78.94
Bra021851.1-P Field mustard cytosol 83.12 74.13
Bra022939.1-P Field mustard cytosol 83.01 74.03
VIT_05s0049g01560.t01 Wine grape nucleus 66.67 60.39
KRG90363 Soybean nucleus 63.85 58.01
KRG92279 Soybean cytosol 63.42 57.91
KRH33633 Soybean nucleus 63.42 57.62
KRH34531 Soybean cytosol 62.45 56.68
PGSC0003DMT400044198 Potato cytosol 61.9 56.13
Solyc09g090480.2.1 Tomato cytosol 61.58 55.84
GSMUA_Achr4P29190_001 Banana cytosol 51.95 55.17
Os10t0471000-01 Rice cytosol, mitochondrion 19.37 54.24
GSMUA_AchrUn_... Banana cytosol 51.3 54.17
Solyc03g005630.2.1 Tomato cytosol 59.2 53.42
PGSC0003DMT400034999 Potato cytosol 59.31 53.31
GSMUA_Achr1P10950_001 Banana cytosol 52.38 51.93
OQU91659 Sorghum cytosol 41.56 50.73
GSMUA_Achr1P03530_001 Banana cytosol 48.27 50.4
GSMUA_Achr1P16870_001 Banana cytosol 48.59 49.67
KRH70255 Soybean plastid 58.33 49.45
KRH08629 Soybean cytosol 58.33 49.18
Os03t0138600-01 Rice nucleus, plasma membrane 52.27 48.3
TraesCS4B01G338200.1 Wheat mitochondrion 51.62 46.54
TraesCS4D01G334500.1 Wheat mitochondrion 51.52 46.26
TraesCS1B01G168300.2 Wheat cytosol 48.81 46.21
TraesCS1D01G147700.1 Wheat mitochondrion 49.24 45.91
EER92892 Sorghum mitochondrion 52.06 45.9
TraesCS5A01G507900.1 Wheat mitochondrion 51.08 45.83
Zm00001d032737_P001 Maize cytosol 49.57 45.75
HORVU1Hr1G039810.1 Barley mitochondrion 48.81 45.74
TraesCS1A01G150700.1 Wheat cytosol 49.03 45.71
HORVU4Hr1G083660.3 Barley mitochondrion 50.87 45.63
Zm00001d027590_P001 Maize mitochondrion 51.41 45.41
Zm00001d010939_P004 Maize mitochondrion 43.94 40.12
EES18963 Sorghum mitochondrion 43.72 38.59
Bra034270.1-P Field mustard cytosol 38.85 36.15
Bra039035.1-P Field mustard cytosol 36.26 35.19
Bra009303.1-P Field mustard cytosol, peroxisome, plastid 26.95 23.12
Bra040967.1-P Field mustard cytosol 20.78 17.16
Protein Annotations
EnsemblPlants:Bra032507.1EnsemblPlants:Bra032507.1-PEnsemblPlantsGene:Bra032507InterPro:DUF810InterPro:IPR014770InterPro:IPR014772
InterPro:Munc13_1InterPro:Munc13_dom-2PANTHER:PTHR31280PANTHER:PTHR31280:SF1PFAM:PF05664PFscan:PS51258
PFscan:PS51259SEG:segUniParc:UPI0002543614UniProt:M4EUM5MapMan:35.1:
Description
AT1G04470 (E=0.0) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33420.1); Has 116 Blast hits to 109 proteins in 23 species: Archae - 0; Bacteria - 1; Metazoa - 4; Fungi - 4; Plants - 95; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Coordinates
chrA09:+:36358315..36362061
Molecular Weight (calculated)
103112.0 Da
IEP (calculated)
7.149
GRAVY (calculated)
-0.266
Length
924 amino acids
Sequence
(BLAST)
001: MLKRSPSRRM STTIGTALGA KSAPSSPGNG SIGGGGGGSS LHISQGAGFL TVPPSRPRRP LTSAEIMRQQ MRVTEQGDTR LRKTLTRTLV GQTGRGAETI
101: ILPLELLRHV KTSEFGDVHE YQIWQRRQLK VLEAGLLLHP SIPLDKTNNF AMRLREIIRQ SETKPIDTGK SSETMSTLCN AVVSLACRNA NQDVCHWADG
201: YPLNVHLYVA LLQSIFDIRD ETLVLDEIDE LLELMKKTWS MLGITRPVHN LCFTWVLFHQ YIVTSQMEPD LLGASHAMLA EVANDAKKSD REALYVKLLT
301: STLASMQGWT EKRLLSYHDY FQRGNVGLIE NLLPLALSSS KIVGEDVTIS QGNSQEKGDV KLVDSSGDRV DYYIRASIKN SFSKVIENMK TKTAVTEEGE
401: EAAKMLLELA KETEELALRE RECFSPILKR WYSVAAGVAS VSLHQCYGSI LMQYLAGRST ITKETVEVLH TAGKLEKVLV QMVVEESEEC DDGGKGLVRE
501: MVPYEVDSII LRLLKQWTEE KLKAVHECLS RAKEAETWNP KSKSEPYAQS AGELMKLAKD AIDEFFEIPI GITEDLVHDL AEGLEQLFQE YTAFVASCGS
601: KQSYIPTLPP LTRCNRDSKF VKLWKKATPC TASGEDLNNL SGGAPVIADG NHPRPSTSRG TQRLYIRLNT LHFLSTQLHS LNKALSLNPK VLPAARKRYR
701: ERTNSSSYFD FTQAGIETAC QHVSEVAAYR LIFLDSYSVF YESLYTGDVA NARIKPALRI LKQNLTLMTA ILADRAQALA MREVMKASFE VVLTVLLAGG
801: HSRVFYRSDH ELIEEDFESL KKVYCTCGEG LIPEEVVDRE AETVEGVIQL MSQPTEQLME DFSIVTCESS GMGLVGTGQK LPMPPTTGRW NRSDPNTILR
901: VLCYRDDRVA NQFLKKSFQL GKRR
Best Arabidopsis Sequence Match ( AT1G04470.1 )
(BLAST)
0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
Arabidopsis Description
F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.