Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35337 | Canola | cytosol | 97.89 | 98.98 |
| AT2G25800.1 | Thale cress | plastid | 91.94 | 92.5 |
| KRH62073 | Soybean | cytosol, peroxisome | 39.48 | 74.67 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 74.62 | 73.44 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 72.81 | 72.44 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 33.53 | 72.23 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 72.61 | 72.1 |
| KRH52752 | Soybean | nucleus | 72.71 | 71.77 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 58.51 | 65.72 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 57.4 | 65.14 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 51.56 | 64.24 |
| Os09t0346700-01 | Rice | plasma membrane | 63.14 | 63.65 |
| Zm00001d020178_P002 | Maize | plastid | 62.44 | 63.14 |
| EER98780 | Sorghum | plastid | 62.44 | 62.75 |
| Zm00001d005638_P001 | Maize | plastid | 62.03 | 62.73 |
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 61.43 | 62.31 |
| TraesCS5A01G187000.1 | Wheat | mitochondrion, plastid | 61.33 | 62.21 |
| TraesCS5B01G185400.1 | Wheat | mitochondrion, plastid | 61.33 | 62.21 |
| Bra039035.1-P | Field mustard | cytosol | 57.0 | 59.45 |
| HORVU5Hr1G041860.5 | Barley | plastid | 56.5 | 57.07 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 52.37 | 55.08 |
| Os08t0390100-01 | Rice | cytosol, plastid | 37.16 | 54.83 |
| OQU80385 | Sorghum | cytosol | 45.72 | 54.7 |
| HORVU4Hr1G057790.4 | Barley | plastid | 53.07 | 53.5 |
| TraesCS4B01G199800.1 | Wheat | plastid | 53.07 | 53.18 |
| TraesCS4D01G200800.1 | Wheat | plastid | 52.97 | 53.13 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 53.07 | 52.59 |
| Zm00001d032274_P001 | Maize | plastid | 48.34 | 51.72 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 15.81 | 48.46 |
| Bra032507.1-P | Field mustard | mitochondrion, plastid | 36.15 | 38.85 |
| Bra021851.1-P | Field mustard | cytosol | 39.17 | 37.55 |
| Bra022939.1-P | Field mustard | cytosol | 38.97 | 37.36 |
| Bra015318.1-P | Field mustard | cytosol | 38.97 | 37.32 |
| Bra009303.1-P | Field mustard | cytosol, peroxisome, plastid | 27.9 | 25.72 |
| Bra040967.1-P | Field mustard | cytosol | 22.05 | 19.57 |
Protein Annotations
| EnsemblPlants:Bra034270.1 | EnsemblPlants:Bra034270.1-P | EnsemblPlantsGene:Bra034270 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 |
| InterPro:Munc13_1 | InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF15 | PFAM:PF05664 | PFscan:PS51258 |
| PFscan:PS51259 | SEG:seg | UniParc:UPI00025450D8 | UniProt:M4EZM7 | MapMan:35.1 | : |
Description
AT2G25800 (E=0.0) | INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20010.2); Has 242 Blast hits to 156 proteins in 35 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).
Coordinates
chrA04:-:11542469..11546057
Molecular Weight (calculated)
110007.0 Da
IEP (calculated)
8.277
GRAVY (calculated)
-0.253
Length
993 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHLFRELSL GHSKRETTPP PPPSMTSTIP SDLPPSPLGQ LAVQFSESDL RLIAYEIFVA ACRSATGKPL SSAVSSLSVA NPDSPSNGVS PASPAAQRSL
101: TAAAASKMKK ALGMKSLSSL SPGSTKSPGS GSGSGSGGKP KRPTTVGELM RIQMRVSESV DSRVRRAFLR IAASQVGRKI ESVVLPLELL QQLKSSDFTD
201: QQEYNAWLKR SLKVLEAGLL LHPRVPLDKT SSSQRLRQII HGALDRPLET GRNNEQMQSL RSAVMSLASR SDGSFSDSCH WADGSPFNLR LYEMLLEACF
301: DSSDATSMVE EVDDLMEHIK KTWVILGINQ MLHNLCFTWL LFSRYVVTGQ VEMDLLYACE SQLAEVAKDA KTTKDPEYSQ VLSATLSAIL GWAEKRLLAY
401: HDTFDRSNVG TMEGIVSLGV SAARILVEDI SNEYRRRRKG EVDVARTRIE TYIRSSLRTA FAQASRMEKA DSSRRASRNQ KNPLPVLAIL AKDIGELAVQ
501: EKRMFSPIWK RWHPFAAGVA VATLHVCYGN EIKQFISGIS ELTPDAVQVL RAADKLEKDL VQIAVEDSVD SDDGGKAIIR EMPPFEAETV IANLVKDWIK
601: ARIDRLKEWV DRNLQQEVWN PVENQEGGYA LSAAEVLRIT DETLEAFFQL PIPMHPAVLP DLIIGLDKYL QYYVSKAKSG CGSRTTYMPT MPALTRCTTE
701: SKFQGVWKKK EKSPPSQKKN SQVPIANGEA GSFGVTQICI RINSLHKIRS ELDVVEKRVI THLRNCESAH TDDFSNGLGK KFELTPAACI EGVQQLSESL
801: AYKVVFHDLS HALWDGLYIG DLSSSRIEPF LKELEQNLTV IAETVHERVR TRIITDLMRA SFDGFLLVLL AGGPSRAFTI QDSQIMEQDF KSMKDLFWAN
901: GDGLAMDLID KFSTTVRGVL PLFSTDTDSL IERFKGMTLE AYGSSAKSRL PLPPTSGQWS GMEPNTLLRV LCYRNDEAAT RFLKKTYNLP KKL
101: TAAAASKMKK ALGMKSLSSL SPGSTKSPGS GSGSGSGGKP KRPTTVGELM RIQMRVSESV DSRVRRAFLR IAASQVGRKI ESVVLPLELL QQLKSSDFTD
201: QQEYNAWLKR SLKVLEAGLL LHPRVPLDKT SSSQRLRQII HGALDRPLET GRNNEQMQSL RSAVMSLASR SDGSFSDSCH WADGSPFNLR LYEMLLEACF
301: DSSDATSMVE EVDDLMEHIK KTWVILGINQ MLHNLCFTWL LFSRYVVTGQ VEMDLLYACE SQLAEVAKDA KTTKDPEYSQ VLSATLSAIL GWAEKRLLAY
401: HDTFDRSNVG TMEGIVSLGV SAARILVEDI SNEYRRRRKG EVDVARTRIE TYIRSSLRTA FAQASRMEKA DSSRRASRNQ KNPLPVLAIL AKDIGELAVQ
501: EKRMFSPIWK RWHPFAAGVA VATLHVCYGN EIKQFISGIS ELTPDAVQVL RAADKLEKDL VQIAVEDSVD SDDGGKAIIR EMPPFEAETV IANLVKDWIK
601: ARIDRLKEWV DRNLQQEVWN PVENQEGGYA LSAAEVLRIT DETLEAFFQL PIPMHPAVLP DLIIGLDKYL QYYVSKAKSG CGSRTTYMPT MPALTRCTTE
701: SKFQGVWKKK EKSPPSQKKN SQVPIANGEA GSFGVTQICI RINSLHKIRS ELDVVEKRVI THLRNCESAH TDDFSNGLGK KFELTPAACI EGVQQLSESL
801: AYKVVFHDLS HALWDGLYIG DLSSSRIEPF LKELEQNLTV IAETVHERVR TRIITDLMRA SFDGFLLVLL AGGPSRAFTI QDSQIMEQDF KSMKDLFWAN
901: GDGLAMDLID KFSTTVRGVL PLFSTDTDSL IERFKGMTLE AYGSSAKSRL PLPPTSGQWS GMEPNTLLRV LCYRNDEAAT RFLKKTYNLP KKL
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.