CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032274_P001	Maize	plastid	87.59	78.34
GSMUA_Achr4P08290_001	Banana	cytosol	56.27	58.59
HORVU4Hr1G057790.4	Barley	plastid	67.23	56.65
EER98780	Sorghum	plastid	67.23	56.48
TraesCS4D01G200800.1	Wheat	plastid	66.87	56.06
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	56.39	55.98
TraesCS4B01G199800.1	Wheat	plastid	66.39	55.6
TraesCS4A01G104100.2	Wheat	cytosol	66.87	55.39
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	57.95	54.41
GSMUA_Achr6P26320_001	Banana	cytosol	56.87	53.94
KRH62073	Soybean	cytosol, peroxisome	33.98	53.71
Os08t0390100-01	Rice	cytosol, plastid	42.77	52.75
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	53.98	47.46
KRH60225	Soybean	cytosol	21.33	47.2
VIT_04s0008g03350.t01	Wine grape	mitochondrion	57.23	47.08
CDY35337	Canola	cytosol	54.7	46.23
Solyc08g066600.2.1	Tomato	cytosol, mitochondrion, plastid	55.3	45.99
Bra034270.1-P	Field mustard	cytosol	54.7	45.72
KRH74278	Soybean	cytosol	52.65	45.62
CDX77008	Canola	cytosol	54.46	45.61
PGSC0003DMT400005705	Potato	mitochondrion	54.94	45.6
AT2G25800.1	Thale cress	plastid	54.22	45.59
KRH07260	Soybean	cytosol	52.17	45.53
KRH52752	Soybean	nucleus	55.18	45.53
CDY40469	Canola	cytosol	51.81	45.22
Bra039035.1-P	Field mustard	cytosol	51.81	45.17
AT2G20010.2	Thale cress	nucleus	51.57	44.96
CDY35919	Canola	cytosol	51.57	44.96
PGSC0003DMT400070575	Potato	cytosol	50.0	43.64
Solyc05g018180.2.1	Tomato	cytosol, nucleus	49.88	43.4
KRH60226	Soybean	cytosol	29.28	42.71
KRH41514	Soybean	cytosol	40.24	42.39
KRH62072	Soybean	cytosol, mitochondrion, nucleus	20.96	37.74
Solyc05g041240.1.1	Tomato	endoplasmic reticulum, golgi	13.86	35.49
OQU91659	Sorghum	cytosol	29.4	32.23
EER92892	Sorghum	mitochondrion	36.02	28.53
EES18963	Sorghum	mitochondrion	32.65	25.88
KXG21868	Sorghum	cytosol	29.16	21.88
KXG26932	Sorghum	cytosol	23.13	16.8

Protein Annotations

EnsemblPlants:OQU80385	EnsemblPlantsGene:SORBI_3007G119500	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772	InterPro:Munc13_1
InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF4	PFAM:PF05664	PFscan:PS51258	PFscan:PS51259
ProteinID:OQU80385	ProteinID:OQU80385.1	SEG:seg	UniParc:UPI000B8BAD13	UniProt:A0A1Z5RAB8	MapMan:35.1

Description

hypothetical protein

Coordinates

chr7:-:51407348..51412024

Molecular Weight (calculated)

93571.0 Da

IEP (calculated)

6.470

GRAVY (calculated)

-0.156

Length

830 amino acids

Sequence
(BLAST)

001: MGVTEQADAR IRRVLLRVAA RQLGTHAESL VLPLEFLQKC KASDFPDPLE YEAWQTRNFK LLEAGVLVHP LIPLKKSDIS AKRMRQIIHE AYAGQVETGR
101: NSESMQRLHS AVMSLACRSL CETSDECHWA DGFPFNLHIY KMLIEACFDV EEGTVVDEID EIMELLKKTW PVFGITQMLH NIYFTWALFN HFIMLGQADN
201: GLLSAMENLL VEVAEDAKIT KDPDYCDVLS STLNSIMGWE EKRLCAYHET FNTSNIYSMQ YIISIGISAA KILLEDVSYE YHSGTNRDID VVRTRIETYI
301: KSSLCKAFAQ KMEEADSNRS SINCTPVLSI LAKETTELAI KEKNVYSPIL KKWHPFAAGV AVATLHGCFG NELKKFIVGL TVLTPDTVQV LKAADKLEKN
401: LVHIALEDSM DVDDRGKSVV RQMPPYETGT VLANLVKAWG REQLDKLKIW TDQNLQQETW NPKDNNRDSF APSSVEMLHI IEETLDALFR LSVPINSTLF
501: SDLTAGLDKC LHYYISKVKT GCGTRSTLFP QLPHLTRCDV GSKLFKKNEK PQFLMRRGSQ VGSTTGNEAS SLRGLCLRIN TIYYIQTELG NLHVKMKERL
601: QQNVELAQPD IADGLNINFG LSQVACQEGI RQLCETTAYM VMFNDLSHFL LDTLYVGGPA SNRILPLLKE LGPILRIISA TVHNKVQNRL ITALMKASFD
701: GFLLVLLAGG PTRAFSCQDY QVIEDDFRAL RGLYLSYCDG LPEELVGKAS SEVKNILPLL RTDTETLIER FKQLISGSYE PTANSRFPMP PVPARWSPDN
801: PNTILRVLCY RNDETATKFL KKTYDLPKTL

Best Arabidopsis Sequence Match ( AT2G25800.1 )
(BLAST)

001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL

Arabidopsis Description

Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.