Factsheet for Solyc05g041240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

nucleus 2
extracellular 3
golgi 4
plasma membrane 3
endoplasmic reticulum 4
vacuole 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62072	Soybean	cytosol, mitochondrion, nucleus	31.48	22.13
Os08t0390100-01	Rice	cytosol, plastid	37.35	17.98
Solyc08g066600.2.1	Tomato	cytosol, mitochondrion, plastid	54.63	17.74
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	47.22	17.31
GSMUA_Achr6P26320_001	Banana	cytosol	44.75	16.57
AT2G25800.1	Thale cress	plastid	49.38	16.21
CDY35337	Canola	cytosol	48.46	15.99
Bra034270.1-P	Field mustard	cytosol	48.46	15.81
CDX77008	Canola	cytosol	48.15	15.74
VIT_04s0008g03350.t01	Wine grape	mitochondrion	48.46	15.56
Zm00001d005638_P001	Maize	plastid	44.44	14.66
Os09t0346700-01	Rice	plasma membrane	44.44	14.62
Zm00001d020178_P002	Maize	plastid	43.83	14.46
KRH52752	Soybean	nucleus	44.75	14.41
EER98780	Sorghum	plastid	43.83	14.37
GSMUA_Achr4P08290_001	Banana	cytosol	35.19	14.3
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	43.21	14.3
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	43.21	14.3
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	42.9	14.2
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	41.36	14.19
OQU80385	Sorghum	cytosol	35.49	13.86
HORVU5Hr1G041860.5	Barley	plastid	41.67	13.73
Zm00001d032274_P001	Maize	plastid	37.96	13.25
HORVU4Hr1G057790.4	Barley	plastid	39.51	12.99
TraesCS4D01G200800.1	Wheat	plastid	38.89	12.73
TraesCS4A01G104100.2	Wheat	cytosol	39.2	12.67
Solyc05g018180.2.1	Tomato	cytosol, nucleus	37.04	12.58
TraesCS4B01G199800.1	Wheat	plastid	38.27	12.51
Solyc03g005630.2.1	Tomato	cytosol	31.79	10.06
Solyc09g090480.2.1	Tomato	cytosol	30.56	9.72
KRH62073	Soybean	cytosol, peroxisome	13.89	8.57
Solyc01g096540.2.1	Tomato	cytosol, plastid	19.75	5.77
Solyc08g080520.2.1	Tomato	cytosol	16.36	4.65
Solyc02g071830.1.1	Tomato	endoplasmic reticulum, extracellular	2.47	2.23

Protein Annotations

EnsemblPlants:Solyc05g041240.1.1	EnsemblPlantsGene:Solyc05g041240.1	InterPro:DUF810	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664
UniParc:UPI00027662D3	UniProt:K4C0A5	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr5:+:50869219..50870769

Molecular Weight (calculated)

36838.6 Da

IEP (calculated)

8.662

GRAVY (calculated)

-0.025

Length

324 amino acids

Sequence
(BLAST)

001: MANISVIMDL QPLSGIEYII LVKIVFQQVL VLILCHSLRR QCQNRRDVRC CMSVRVPKII SHLYYIINDN DSVYIDKLRI DRSVFHSLVL ITKNIGVATD
101: QVENDMLDAA DSQLAEVAKD AKTTKDPTYA KILNSTLTTM LGWAEKSLLA YHDSFDAGNI KSMSTVVSIG VSASRSFVED ISNAYRQRFK GEFDVARSRI
201: DTYIRSSLHT TFAQASNTFN RSISAVWLKA YEYGHQSNPL PILSILAKDS GEQASKEKEF FSPILKRRHS FAAEVVVATL HVCYGNDLKQ CFCIGLWCIY
301: LTQNPKHYIL CFCVKNQERI QVKW

Best Arabidopsis Sequence Match ( AT2G20010.1 )
(BLAST)

001: MRISEQIDSR IRRALLRIAS GQLGRRVEMM VLPLELLQQL KASDFPDQEE YESWQRRNLK LLEAGLILYP CVPLSKSDKS VQQLKQIIRS GLERPLDTGK
101: ITGETQNLRS LVMSLASRQN NNGIGSETCH WADGFPLNLR IYQMLLESCF DVNDELLIVE EVDEVLELIK KTWPVLGINQ MIHNVCFLWV LVNRYVSTGQ
201: VENDLLVAAH NLILEIENDA METNDPEYSK ILSSVLSLVM DWGEKRLLAY HDTFNIDNVE TLETTVSLGI LVAKVLGEDI SSEYRRKKKH VDSGRDRVDT
301: YIRSSLRMAF QQTKRMVEHS KKSKSRQSTN NLPALAILAE DIGHLAFNEK AIFSPILKNW HPLAAGVAAA TLHSCYGTEL KKFVSGITEL TPDAIRVLTA
401: ADKLEKDLVQ IAVQDAVDSE DGGKSVIREM PPFEAEVVIG NLVKSWIKIR VDRLKEWIDR NLQQEVWNPR SNKLGIAPSA VDVLRMVDET LEAFFLLPIL
501: LHPVLLPELT SGLDKCMQHY VSKAKSSCGS RNTFLPVLPA LTRCTVGSRL HGVFKKKEKP MVASHRRKSQ LGTGNDSAEI LQFCCRINTL QYIRTEIESS
601: GRKTLNRLPE SEVAALDAKG KIFEQSISYC SKGIQQLSEA TAYKIVFHDL SNVLWDGLYL GEVPSSRIEP FLQELERCLE IISSSVHDRV RTRVISDIMR
701: ASFDGFLLVL LAGGPSRGFT IQDSAAVEED FKFLCDLFWS NGDGLPLDLI EKVSTTVKSI LPLLRTDTDS LIERFKAVCL ENHGSDRGKL PLPPTSGPWS
801: PTEPNTLLRV LCYRYDEPAT KFLKKTYNLP RKLT

Arabidopsis Description

Gls protein (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q9SL80]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.