Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G200800.1 | Wheat | plastid | 94.11 | 93.64 |
| TraesCS4B01G199800.1 | Wheat | plastid | 94.01 | 93.44 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 94.21 | 92.61 |
| Os08t0390100-01 | Rice | cytosol, plastid | 46.6 | 68.2 |
| OQU80385 | Sorghum | cytosol | 56.65 | 67.23 |
| Zm00001d032274_P001 | Maize | plastid | 60.61 | 64.33 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 56.24 | 62.67 |
| HORVU5Hr1G041860.5 | Barley | plastid | 60.91 | 61.04 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 54.11 | 60.91 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 48.73 | 60.23 |
| VIT_11s0016g03330.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 49.95 | 58.85 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 56.04 | 54.71 |
| KRH62073 | Soybean | cytosol, peroxisome | 29.14 | 54.67 |
| Bra039035.1-P | Field mustard | cytosol | 52.59 | 54.41 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 55.13 | 54.41 |
| CDY40469 | Canola | cytosol | 52.49 | 54.36 |
| CDY35919 | Canola | cytosol | 52.28 | 54.1 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 54.62 | 53.8 |
| AT2G20010.2 | Thale cress | nucleus | 51.98 | 53.78 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 51.27 | 53.5 |
| CDY35337 | Canola | cytosol | 52.99 | 53.16 |
| AT2G25800.1 | Thale cress | plastid | 53.2 | 53.09 |
| Bra034270.1-P | Field mustard | cytosol | 53.5 | 53.07 |
| CDX77008 | Canola | cytosol | 53.1 | 52.77 |
| KRH52752 | Soybean | nucleus | 53.4 | 52.29 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 24.06 | 51.41 |
| KRH07260 | Soybean | cytosol | 49.44 | 51.21 |
| KRH74278 | Soybean | cytosol | 49.64 | 51.04 |
| KRH60226 | Soybean | cytosol | 29.14 | 50.44 |
| PGSC0003DMT400070575 | Potato | cytosol | 48.12 | 49.84 |
| Solyc05g018180.2.1 | Tomato | cytosol, nucleus | 47.41 | 48.95 |
| KRH41514 | Soybean | cytosol | 37.77 | 47.21 |
| KRH60225 | Soybean | cytosol | 17.56 | 46.13 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 12.99 | 39.51 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 32.28 | 32.25 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 31.27 | 29.9 |
| HORVU2Hr1G041780.2 | Barley | cytosol | 15.84 | 29.0 |
| HORVU2Hr1G095440.1 | Barley | cytosol, extracellular | 4.26 | 28.97 |
| HORVU2Hr1G127720.4 | Barley | cytosol | 4.57 | 27.78 |
| HORVU2Hr1G041800.16 | Barley | cytosol | 11.98 | 27.25 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G057790.4 | EnsemblPlantsGene:HORVU4Hr1G057790 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF4 | PFAM:PF05664 | PFscan:PS51257 | PFscan:PS51258 |
| PFscan:PS51259 | SEG:seg | UniParc:UPI000B47D855 | UniProt:A0A287P861 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr4H:+:484416412..484421587
Molecular Weight (calculated)
108256.0 Da
IEP (calculated)
8.418
GRAVY (calculated)
-0.202
Length
985 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMARLLPD SRCASASASW TSSLSCDLAT AATTVVTATS SSAMPLAAPF PGLGVPLSDA DLRTTAYEVL VAASRATGGR PLIYIPQSAS TGARSTSSTS
101: TSTSSSGLQR SRTSTAASRV KRSLGLSPSA SSKAGTAAPR RPETVMELVR VNLRVTEQAD SRIRRGLLRI AAGQVLGRRA ESMILPLEFL QRSKASDFPD
201: PHEYEAWQCR NLKLLEAGLL VHPLIPLRKS DIYAQTLREI ISRAYDKPLE TGKNLESMQE LCSAVKSLAG RSLGASSDEC HWADGFPLNL HIYQMLVEAC
301: FDSENGTVVD EIDEVIGLLK KTWVILGINQ MLHNLCFTWA LFNHFATSDQ VDIELLSAAE NQLSVVVKDA KTTEDPDYCD ILVSILSSIT GWTEKRLLAY
401: HETFNASNIV SMQGIVAIGI SAAKILLEDI SQKYPGKRKK ETDVVRGKIE TYIRSSLRTA FAQRMDEADS KRSSRNPVPV LAILAKDISD LASKEKNIYS
501: PILKKWHPLA SGVAVTTLHS CFGNELKQFT VGRTKFTPDT AQVLDAADKL EKNLINIAVE DFLDSDDGGK SLIRQMPPYE AENAIAALVK DWMKERVDKL
601: KGWVDQSLQQ ETWNPKANRQ SFAPSSMKML RMIDEILDAF FQLPISVHSI LFPDLTAGLD GIIQYYVSKA KSCHGTQSTA TPQLPHLTRC DVGSKLFKKK
701: EKPHALLNRG SQVGSSTGKS EGCDLPELCV QINTLHYIQT EVENLKKKAK KCLRNCELSQ DGNGTTDGMN IKFELSQASC QDGIRQLCDA TAHKVVFNYL
801: SHVLLDTLYV GGTVSNRVEP LLRELHSTLG VISGIMHNES RDHLITALMK ASFDGFLLVL LAGGPTRAFT LQDAQIIEND FRALRGLYLA NGDGLPHELV
901: DKASLEVKSV LPLLRTDTES LIQRFKQAIT ELQGSPTKSS FPKPPRVPAQ WSANDPNTIL RVLCYRYDEA ATKFLKKTYK FPKKL
101: TSTSSSGLQR SRTSTAASRV KRSLGLSPSA SSKAGTAAPR RPETVMELVR VNLRVTEQAD SRIRRGLLRI AAGQVLGRRA ESMILPLEFL QRSKASDFPD
201: PHEYEAWQCR NLKLLEAGLL VHPLIPLRKS DIYAQTLREI ISRAYDKPLE TGKNLESMQE LCSAVKSLAG RSLGASSDEC HWADGFPLNL HIYQMLVEAC
301: FDSENGTVVD EIDEVIGLLK KTWVILGINQ MLHNLCFTWA LFNHFATSDQ VDIELLSAAE NQLSVVVKDA KTTEDPDYCD ILVSILSSIT GWTEKRLLAY
401: HETFNASNIV SMQGIVAIGI SAAKILLEDI SQKYPGKRKK ETDVVRGKIE TYIRSSLRTA FAQRMDEADS KRSSRNPVPV LAILAKDISD LASKEKNIYS
501: PILKKWHPLA SGVAVTTLHS CFGNELKQFT VGRTKFTPDT AQVLDAADKL EKNLINIAVE DFLDSDDGGK SLIRQMPPYE AENAIAALVK DWMKERVDKL
601: KGWVDQSLQQ ETWNPKANRQ SFAPSSMKML RMIDEILDAF FQLPISVHSI LFPDLTAGLD GIIQYYVSKA KSCHGTQSTA TPQLPHLTRC DVGSKLFKKK
701: EKPHALLNRG SQVGSSTGKS EGCDLPELCV QINTLHYIQT EVENLKKKAK KCLRNCELSQ DGNGTTDGMN IKFELSQASC QDGIRQLCDA TAHKVVFNYL
801: SHVLLDTLYV GGTVSNRVEP LLRELHSTLG VISGIMHNES RDHLITALMK ASFDGFLLVL LAGGPTRAFT LQDAQIIEND FRALRGLYLA NGDGLPHELV
901: DKASLEVKSV LPLLRTDTES LIQRFKQAIT ELQGSPTKSS FPKPPRVPAQ WSANDPNTIL RVLCYRYDEA ATKFLKKTYK FPKKL
001: MESLPSPFGD PAPNLSNSEL RETAYEILVA ACRSTGSRPL TYIPQSPKSD RSNGLTTASL SPSPSLHRSL TSTAASKVKK ALGMKKRIGD GDGGAGESSS
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT
101: QPDRSKKSVT VGELVRVQMR ISEQIDSRIR RALLRIASGQ LGRRVEMMVL PLELLQQLKA SDFPDQEEYE SWQRRNLKLL EAGLILYPCV PLSKSDKSVQ
201: QLKQIIRSGL ERPLDTGKIT GETQNLRSLV MSLASRQNNN GIGSETCHWA DGFPLNLRIY QMLLESCFDV NDELLIVEEV DEVLELIKKT WPVLGINQMI
301: HNVCFLWVLV NRYVSTGQVE NDLLVAAHNL ILEIENDAME TNDPEYSKIL SSVLSLVMDW GEKRLLAYHD TFNIDNVETL ETTVSLGILV AKVLGEDISS
401: EYRRKKKHVD SGRDRVDTYI RSSLRMAFQQ TKRMVEHSKK SKSRQSTNNL PALAILAEDI GHLAFNEKAI FSPILKNWHP LAAGVAAATL HSCYGTELKK
501: FVSGITELTP DAIRVLTAAD KLEKDLVQIA VQDAVDSEDG GKSVIREMPP FEAEVVIGNL VKSWIKIRVD RLKEWIDRNL QQEVWNPRSN KLGIAPSAVD
601: VLRMVDETLE AFFLLPILLH PVLLPELTSG LDKCMQHYVS KAKSSCGSRN TFLPVLPALT RCTVGSRLHG VFKKKEKPMV ASHRRKSQLG TGNDSAEILQ
701: FCCRINTLQY IRTEIESSGR KTLNRLPESE VAALDAKGKI FEQSISYCSK GIQQLSEATA YKIVFHDLSN VLWDGLYLGE VPSSRIEPFL QELERCLEII
801: SSSVHDRVRT RVISDIMRAS FDGFLLVLLA GGPSRGFTIQ DSAAVEEDFK FLCDLFWSNG DGLPLDLIEK VSTTVKSILP LLRTDTDSLI ERFKAVCLEN
901: HGSDRGKLPL PPTSGPWSPT EPNTLLRVLC YRYDEPATKF LKKTYNLPRK LT
Arabidopsis Description
Gls protein (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q9SL80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.