CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52752	Soybean	nucleus	96.96	44.43
KRH60226	Soybean	cytosol	49.02	39.72
Os08t0390100-01	Rice	cytosol, plastid	52.06	35.66
AT2G25800.1	Thale cress	plastid	73.54	34.35
CDX77008	Canola	cytosol	72.45	33.7
Bra034270.1-P	Field mustard	cytosol	72.23	33.53
CDY35337	Canola	cytosol	71.15	33.4
VIT_04s0008g03350.t01	Wine grape	mitochondrion	72.23	33.0
PGSC0003DMT400005705	Potato	mitochondrion	70.5	32.5
Solyc08g066600.2.1	Tomato	cytosol, mitochondrion, plastid	70.28	32.46
Solyc05g041240.1.1	Tomato	endoplasmic reticulum, golgi	22.13	31.48
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	59.65	31.11
GSMUA_Achr6P26320_001	Banana	cytosol	59.0	31.09
Os09t0346700-01	Rice	plasma membrane	62.04	29.04
Zm00001d005638_P001	Maize	plastid	61.61	28.92
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	61.17	28.8
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	61.17	28.8
Zm00001d020178_P002	Maize	plastid	61.17	28.72
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	60.95	28.7
EER98780	Sorghum	plastid	61.39	28.64
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	54.01	26.38
KRH41514	Soybean	cytosol	43.38	25.38
KRH07260	Soybean	cytosol	50.98	24.71
KRH74278	Soybean	cytosol	51.19	24.63
HORVU5Hr1G041860.5	Barley	plastid	52.06	24.42
HORVU4Hr1G057790.4	Barley	plastid	51.41	24.06
TraesCS4B01G199800.1	Wheat	plastid	51.41	23.92
TraesCS4D01G200800.1	Wheat	plastid	51.19	23.84
GSMUA_Achr4P08290_001	Banana	cytosol	41.0	23.71
TraesCS4A01G104100.2	Wheat	cytosol	51.41	23.65
Zm00001d032274_P001	Maize	plastid	46.2	22.95
OQU80385	Sorghum	cytosol	37.74	20.96
KRG92279	Soybean	cytosol	42.52	19.37
KRH34531	Soybean	cytosol	41.87	18.96
KRG90363	Soybean	nucleus	39.91	18.09
KRH33633	Soybean	nucleus	39.48	17.9
KRH08629	Soybean	cytosol	39.7	16.7
KRH70255	Soybean	plastid	38.18	16.15
KRH20669	Soybean	endoplasmic reticulum	31.89	13.34
KRH13315	Soybean	cytosol, endoplasmic reticulum, nucleus	31.67	13.22
KRH62073	Soybean	cytosol, peroxisome	0.0	0.0
KRH60225	Soybean	cytosol	0.0	0.0
KRH13324	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02002216	EnsemblPlants:KRH62072	EnsemblPlantsGene:GLYMA_04G0843002	InterPro:DUF810	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15
PFAM:PF05664	ProteinID:KRH62072	ProteinID:KRH62072.1	SEG:seg	UniParc:UPI0006EDF37C	UniProt:A0A0R0KBD0
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:7153009..7154905

Molecular Weight (calculated)

50715.6 Da

IEP (calculated)

9.047

GRAVY (calculated)

-0.343

Length

461 amino acids

Sequence
(BLAST)

001: MAHLFRDLSL GHSKRDSTPP LPPPPIMPPK PAAVTAADDL PSPLGQLSAS LSDSDLALTA YEIFVAACRT SSGKPLSSAA NHSSTNSPSQ NSPNSPALQR
101: SITSTAASKV KKAFGLKSPG SASRKSPGSG SGQGKPKRPL TVGELMRNQM RVSEAMDSRV RRALLRISAG QVGRRIESVV VPLELLQQLK ASDFTDQQEY
201: DDWQKRTLKV LEAGLILHPH MPLDKSNSAV QRLRQIVHAA LDKPIETGKN TESMQVLRSA VMSLANRSYD GSYVDSCHWA DGIPLNLRLY EMLLQSCFDA
301: NDESSIIEEF DELMEQIKKT WGILGLNQTL HNLCFTWVLF HRFVVTGQLD LDLLSAADGQ LAEVAKDAKT TKDAEYSKVL SSTLTSIMGW AEKRLLAYHE
401: TFDRGNVETM QGIVSLGVAA AKILVEDISN EYRRRRKNEV NVARERIETY IRSSLRTAFA Q

Best Arabidopsis Sequence Match ( AT1G04470.1 )
(BLAST)

0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR

Arabidopsis Description

F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.