Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 98.98 | 98.98 |
| TraesCS5B01G185400.1 | Wheat | mitochondrion, plastid | 98.67 | 98.67 |
| HORVU5Hr1G041860.5 | Barley | plastid | 86.41 | 86.06 |
| EER98780 | Sorghum | plastid | 86.72 | 85.93 |
| Os09t0346700-01 | Rice | plasma membrane | 86.21 | 85.69 |
| Zm00001d020178_P002 | Maize | plastid | 85.9 | 85.64 |
| Zm00001d005638_P001 | Maize | plastid | 85.8 | 85.54 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 64.45 | 71.38 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 62.31 | 69.71 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 55.77 | 68.51 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 65.88 | 64.37 |
| VIT_11s0016g03330.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 54.65 | 64.0 |
| KRH62073 | Soybean | cytosol, peroxisome | 33.91 | 63.24 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 63.84 | 62.63 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 63.33 | 62.0 |
| AT2G25800.1 | Thale cress | plastid | 62.41 | 61.9 |
| CDY35337 | Canola | cytosol | 61.7 | 61.51 |
| Bra034270.1-P | Field mustard | cytosol | 62.21 | 61.33 |
| CDX77008 | Canola | cytosol | 62.0 | 61.25 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 28.8 | 61.17 |
| KRH52752 | Soybean | nucleus | 62.61 | 60.93 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 62.61 | 60.75 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 56.79 | 58.9 |
| AT2G20010.2 | Thale cress | nucleus | 56.08 | 57.67 |
| Bra039035.1-P | Field mustard | cytosol | 56.08 | 57.67 |
| CDY40469 | Canola | cytosol | 55.98 | 57.62 |
| CDY35919 | Canola | cytosol | 55.87 | 57.46 |
| KRH74278 | Soybean | cytosol | 55.46 | 56.68 |
| KRH07260 | Soybean | cytosol | 55.06 | 56.68 |
| KRH60226 | Soybean | cytosol | 32.89 | 56.59 |
| PGSC0003DMT400070575 | Potato | cytosol | 53.22 | 54.78 |
| Solyc05g018180.2.1 | Tomato | cytosol, nucleus | 52.81 | 54.19 |
| KRH41514 | Soybean | cytosol | 42.19 | 52.41 |
| KRH60225 | Soybean | cytosol | 19.61 | 51.2 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 14.3 | 43.21 |
| TraesCS1A01G150700.1 | Wheat | cytosol | 35.24 | 34.81 |
| TraesCS5A01G507900.1 | Wheat | mitochondrion | 35.85 | 34.08 |
| TraesCS1A01G052200.3 | Wheat | cytosol, mitochondrion, nucleus | 28.19 | 24.95 |
| TraesCS2A01G401500.1 | Wheat | cytosol | 24.0 | 20.69 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G187000.1 | EnsemblPlantsGene:TraesCS5A01G187000 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | ncoils:Coil | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF15 | PFAM:PF05664 | PFscan:PS51258 |
| PFscan:PS51259 | SEG:seg | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:388637731..388643329
Molecular Weight (calculated)
107527.0 Da
IEP (calculated)
8.127
GRAVY (calculated)
-0.274
Length
979 amino acids
Sequence
(BLAST)
(BLAST)
001: MARLFRDPRR DSASSSSNGF APPAASPAAS ALPSPFSDLG VQLSPAELRE TAYEVLVAAS RTTGGKPLTY IPQAGPASPA SASSASSANS SSSSLQRSLT
101: SAAASKMKKA LGLKSSASSK GGSPGSGGAG VKAAPRRPAT VGELMRAQMR VSEPADARIR RGLLRIAAGQ LGRRAEAMVL PLEFLQQFKA SDFPDLQEHD
201: AWQGRNLKLI EAGLLVHPFV PLNKSDSSAQ RLKQIIRGAY DRPLETGKNS ESMQVLRTAV TSLAGRSHDG TSDGCHWADG FPLNLHLYQM LVEACFDSDD
301: STVVDEIDEV IELLKKTWVI LGINQMLHNL CFAWALFNHF VMSGQVDIEL LSAAENQLVE VAKDAKTTKD PNYCKVLSST LSSIMGWTEK RLLAYHETFN
401: TSNIESMQGI VSIGVTAAKV LVEDISHEYR RRRKEETDVA RSRIETYVRS SLRTAFAQRM EEADSKRSSR NPTPVMSILA KDIGDLAIKE KNLYSPILKT
501: WHPLASGVAV ATLHSCYGSE LKQFIAGLTE LTPETVQVLK SADKLEKDLV NIAVEDSVDS DDGGKSLIRE MPPYEAENAI ANLVKLWIKE RVDRLKGWVD
601: RNLKQETWSP GANRDNFAPS SVEMLRIIGE TLDAFFELPI PMHPALLPDL TAGLDRSLQL YVSKAKSGCG SRSSFMPELP PLTRCEVGSK LLFKKKEKPQ
701: NPQHRGPQNG ATNGTDPLGL PQLCVRLNTL QYIRSELENL EKKIKTCLRN VESAQADITN GLEFKFELCQ AACQEGIQHL CETTAYKVTF FDLGHILWDT
801: LYIADIASSR VDLLLRELDP ILETISGTVH IKVRNRAITA LMKATFDGFL LVILAGGPLR AFTRQDSQII EGDFRSLRDL FLADGDGLPE ELVDKASSQV
901: KNVLPLLRTD SEGLIERFKR LIADSDQSRT ASRGKLPMPT TTGHWSPNDA NTVLRVLCYR HEEAATRFLK KTYGLPKKL
101: SAAASKMKKA LGLKSSASSK GGSPGSGGAG VKAAPRRPAT VGELMRAQMR VSEPADARIR RGLLRIAAGQ LGRRAEAMVL PLEFLQQFKA SDFPDLQEHD
201: AWQGRNLKLI EAGLLVHPFV PLNKSDSSAQ RLKQIIRGAY DRPLETGKNS ESMQVLRTAV TSLAGRSHDG TSDGCHWADG FPLNLHLYQM LVEACFDSDD
301: STVVDEIDEV IELLKKTWVI LGINQMLHNL CFAWALFNHF VMSGQVDIEL LSAAENQLVE VAKDAKTTKD PNYCKVLSST LSSIMGWTEK RLLAYHETFN
401: TSNIESMQGI VSIGVTAAKV LVEDISHEYR RRRKEETDVA RSRIETYVRS SLRTAFAQRM EEADSKRSSR NPTPVMSILA KDIGDLAIKE KNLYSPILKT
501: WHPLASGVAV ATLHSCYGSE LKQFIAGLTE LTPETVQVLK SADKLEKDLV NIAVEDSVDS DDGGKSLIRE MPPYEAENAI ANLVKLWIKE RVDRLKGWVD
601: RNLKQETWSP GANRDNFAPS SVEMLRIIGE TLDAFFELPI PMHPALLPDL TAGLDRSLQL YVSKAKSGCG SRSSFMPELP PLTRCEVGSK LLFKKKEKPQ
701: NPQHRGPQNG ATNGTDPLGL PQLCVRLNTL QYIRSELENL EKKIKTCLRN VESAQADITN GLEFKFELCQ AACQEGIQHL CETTAYKVTF FDLGHILWDT
801: LYIADIASSR VDLLLRELDP ILETISGTVH IKVRNRAITA LMKATFDGFL LVILAGGPLR AFTRQDSQII EGDFRSLRDL FLADGDGLPE ELVDKASSQV
901: KNVLPLLRTD SEGLIERFKR LIADSDQSRT ASRGKLPMPT TTGHWSPNDA NTVLRVLCYR HEEAATRFLK KTYGLPKKL
001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL
Arabidopsis Description
Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.