CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62073	Soybean	cytosol, peroxisome	58.4	41.71
KRH13324	Soybean	cytosol	12.27	35.11
KRH41514	Soybean	cytosol	63.47	30.2
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	64.0	28.71
KRH07260	Soybean	cytosol	70.4	27.76
KRH74278	Soybean	cytosol	70.13	27.45
GSMUA_Achr4P08290_001	Banana	cytosol	50.13	23.59
PGSC0003DMT400070575	Potato	cytosol	59.47	23.45
Solyc05g018180.2.1	Tomato	cytosol, nucleus	59.47	23.38
AT2G20010.2	Thale cress	nucleus	56.53	22.27
Bra039035.1-P	Field mustard	cytosol	55.47	21.85
CDY35919	Canola	cytosol	55.47	21.85
KRH52752	Soybean	nucleus	58.13	21.67
CDY40469	Canola	cytosol	54.93	21.66
OQU80385	Sorghum	cytosol	47.2	21.33
GSMUA_Achr6P26320_001	Banana	cytosol	47.73	20.46
Zm00001d020178_P002	Maize	plastid	53.07	20.26
Zm00001d005638_P001	Maize	plastid	52.53	20.06
EER98780	Sorghum	plastid	52.8	20.04
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	47.2	20.02
Os09t0346700-01	Rice	plasma membrane	52.53	20.0
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	51.73	19.82
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	51.2	19.61
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	51.2	19.61
HORVU5Hr1G041860.5	Barley	plastid	50.67	19.33
Zm00001d032274_P001	Maize	plastid	45.33	18.32
HORVU4Hr1G057790.4	Barley	plastid	46.13	17.56
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	44.0	17.48
TraesCS4B01G199800.1	Wheat	plastid	46.13	17.46
TraesCS4D01G200800.1	Wheat	plastid	45.6	17.27
TraesCS4A01G104100.2	Wheat	cytosol	45.87	17.17
KRG90363	Soybean	nucleus	34.67	12.78
KRH33633	Soybean	nucleus	34.13	12.59
KRH34531	Soybean	cytosol	33.33	12.28
KRG92279	Soybean	cytosol	32.8	12.15
KRH08629	Soybean	cytosol	33.07	11.31
KRH70255	Soybean	plastid	32.0	11.01
KRH20669	Soybean	endoplasmic reticulum	28.0	9.53
KRH13315	Soybean	cytosol, endoplasmic reticulum, nucleus	28.0	9.51
Os08t0390100-01	Rice	cytosol, plastid	8.27	4.61
KRH62072	Soybean	cytosol, mitochondrion, nucleus	0.0	0.0
KRH60226	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02003355	EnsemblPlants:KRH60225	EnsemblPlantsGene:GLYMA_05G2278002	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772
InterPro:Munc13_1	InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664	PFscan:PS51258
PFscan:PS51259	ProteinID:KRH60225	ProteinID:KRH60225.1	UniParc:UPI0006EDBA5C	UniProt:A0A0R0K047	MapMan:35.1

Description

hypothetical protein

Coordinates

chr5:-:40581438..40582896

Molecular Weight (calculated)

42297.5 Da

IEP (calculated)

8.658

GRAVY (calculated)

-0.125

Length

375 amino acids

Sequence
(BLAST)

001: VWNPRANKEC FAPSALEILG IIEDSLEAFF LLPIPMHAAL LPELMSALDK SLQQYLLKAK SGCGNRNTFI PIMPALTRCS ARSKFHDVFR KKEKSQATDQ
101: RRIFHHGTTN VDSSFGLPQF CVRINTMQRI GMGLKVLEKR TVARLGNSKS TKEDGIEKGL KFKLSKAASV EGIRQLSEAM AYKVIFQDLR YVLWDGLYVG
201: EVSSTRIEPF LEELNQCLKI ILSTVHDRVL THVITEVMKA SFDGFLLVLL AGGPARAFSL EDHVIIEEDF KLLTDLFWSN GEGLPADLIE KHCTTVKEVL
301: PLFRMDTEDL TELFSELILG MYGSSAKFHL PLPTTSGHWS PREPNTLLRI LCHRSDDAAA KFLKKNYNLP KKSNR

Best Arabidopsis Sequence Match ( AT1G04470.1 )
(BLAST)

0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR

Arabidopsis Description

F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.