Factsheet for Os08t0390100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60226	Soybean	cytosol	44.87	53.08
KRH62072	Soybean	cytosol, mitochondrion, nucleus	35.66	52.06
Os09t0346700-01	Rice	plasma membrane	70.73	48.32
HORVU4Hr1G057790.4	Barley	plastid	68.2	46.6
TraesCS4D01G200800.1	Wheat	plastid	68.35	46.46
TraesCS4B01G199800.1	Wheat	plastid	68.35	46.42
TraesCS4A01G104100.2	Wheat	cytosol	68.5	46.01
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	60.33	45.93
GSMUA_Achr6P26320_001	Banana	cytosol	58.1	44.69
Zm00001d032274_P001	Maize	plastid	59.29	43.0
OQU80385	Sorghum	cytosol	52.75	42.77
GSMUA_Achr4P08290_001	Banana	cytosol	47.4	40.03
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	54.68	38.98
Solyc08g066600.2.1	Tomato	cytosol, mitochondrion, plastid	57.65	38.88
PGSC0003DMT400005705	Potato	mitochondrion	57.5	38.7
VIT_04s0008g03350.t01	Wine grape	mitochondrion	57.21	38.16
AT2G25800.1	Thale cress	plastid	55.87	38.1
CDX77008	Canola	cytosol	55.13	37.44
KRH41514	Soybean	cytosol	43.83	37.44
Solyc05g041240.1.1	Tomato	endoplasmic reticulum, golgi	17.98	37.35
CDY35337	Canola	cytosol	54.38	37.27
Bra034270.1-P	Field mustard	cytosol	54.83	37.16
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	45.91	36.96
KRH52752	Soybean	nucleus	55.13	36.88
Bra039035.1-P	Field mustard	cytosol	51.41	36.34
CDY40469	Canola	cytosol	51.26	36.28
CDY35919	Canola	cytosol	50.97	36.03
AT2G20010.2	Thale cress	nucleus	50.52	35.71
KRH07260	Soybean	cytosol	50.37	35.65
KRH74278	Soybean	cytosol	50.67	35.59
PGSC0003DMT400070575	Potato	cytosol	48.89	34.6
Solyc05g018180.2.1	Tomato	cytosol, nucleus	48.29	34.07
KRH62073	Soybean	cytosol, peroxisome	19.32	24.76
Os04t0568800-01	Rice	cytosol	7.28	24.26
Os03t0138600-01	Rice	nucleus, plasma membrane	32.99	22.2
Os10t0470900-01	Rice	nucleus	8.32	12.07
KRH60225	Soybean	cytosol	4.61	8.27
Os04t0568850-00	Rice	cytosol	2.08	7.22
Os10t0471000-01	Rice	cytosol, mitochondrion	0.74	1.52
Os04t0568900-01	Rice	endoplasmic reticulum, plasma membrane	0.15	0.33
Os03t0683700-02	Rice	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Os08t0390100-01	EnsemblPlantsGene:Os08g0390100	InterPro:DUF810	InterPro:IPR014770	InterPro:Munc13_1	PANTHER:PTHR31280
PANTHER:PTHR31280:SF4	PFAM:PF05664	PFscan:PS51258	ProteinID:BAT05282.1	SEG:seg	UniParc:UPI0001C7B8D6
UniProt:A0A0N7KPT1	MapMan:35.1	:	:	:	:

Description

Similar to predicted protein. (Os08t0390100-01)

Coordinates

chr8:-:18480942..18486765

Molecular Weight (calculated)

73703.1 Da

IEP (calculated)

7.322

GRAVY (calculated)

-0.124

Length

673 amino acids

Sequence
(BLAST)

001: MARFFRDSTS SSRSSSDLAA GADASASAAT TAASSRTPPL PSPFPDLGVP LSAAELRATA YEVLVAASRA TGAKPLTYIT QSAASAASAA APAPSLSSSI
101: HRSLASTAAA SSSKVKKALG LRRSSASSSS KRRGARRPAT VAELVRVQLG VTEQADARIR RALLRIAAGQ LGKHAESLVL PLEFLQQFKA SDFLDPHEYE
201: AWQLRYLKLL EAGLLFHPLV PLKKSDISAL RLRQVIHGAY DKPVETEKNS KLLVELCSAA RALAGRSLIE TFDECHWADG FPLNLHIYQM LIEACFDSED
301: GAVVDEIDEV VEMLTKTWPI LGINQMFHNL CFAWALFNHF VMSGQADIEL LSGAGIQLTE VVKDAKTTKD PDYCDVLIST INSIMGWTEK RLLAYHETFS
401: ASNIDSMQGI VSIGVSTAKI LAEDISHEYH RKRKQETDVV VHSKIETYIR SSLRTAFAQK MEEADSKRSS RHPVPVLSIL AKAIGDLATK EKTVYSPVLK
501: KWHPLATSVA VATLHSCFGN EIKQFIAGLT DLTPDAAQVL KAADKLEKDL VNIAVEDSVN IDDDGKLLIR EMLPYEAENV MANLVKAWVK ERVDRLKGWI
601: DKNLQHETWN PKANGENFAP SSMKMMQIID DTLQAFFQFP LTMHSTLHSD LATGLDRNIQ YYVSKSKAGC GTY

Best Arabidopsis Sequence Match ( AT2G25800.1 )
(BLAST)

001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL

Arabidopsis Description

Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.