Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G199800.1 | Wheat | plastid | 98.08 | 97.98 |
| TraesCS4A01G104100.2 | Wheat | cytosol | 96.97 | 95.81 |
| HORVU4Hr1G057790.4 | Barley | plastid | 93.64 | 94.11 |
| Os08t0390100-01 | Rice | cytosol, plastid | 46.46 | 68.35 |
| OQU80385 | Sorghum | cytosol | 56.06 | 66.87 |
| TraesCS5D01G192300.1 | Wheat | mitochondrion, plastid | 65.35 | 66.09 |
| Zm00001d032274_P001 | Maize | plastid | 60.1 | 64.12 |
| GSMUA_Achr3P16260_001 | Banana | cytosol, mitochondrion | 55.25 | 61.88 |
| GSMUA_Achr6P26320_001 | Banana | cytosol | 53.54 | 60.57 |
| GSMUA_Achr4P08290_001 | Banana | cytosol | 48.28 | 59.97 |
| VIT_11s0016g03330.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 49.09 | 58.13 |
| KRH62073 | Soybean | cytosol, peroxisome | 28.99 | 54.67 |
| Solyc08g066600.2.1 | Tomato | cytosol, mitochondrion, plastid | 54.55 | 54.11 |
| VIT_04s0008g03350.t01 | Wine grape | mitochondrion | 55.05 | 54.01 |
| Bra039035.1-P | Field mustard | cytosol | 51.82 | 53.89 |
| CDY40469 | Canola | cytosol | 51.72 | 53.84 |
| CDY35919 | Canola | cytosol | 51.72 | 53.78 |
| PGSC0003DMT400005705 | Potato | mitochondrion | 54.04 | 53.5 |
| AT2G20010.2 | Thale cress | nucleus | 51.41 | 53.47 |
| GSMUA_Achr4P15490_001 | Banana | golgi, plasma membrane | 50.81 | 53.28 |
| CDY35337 | Canola | cytosol | 52.63 | 53.05 |
| AT2G25800.1 | Thale cress | plastid | 52.83 | 52.99 |
| Bra034270.1-P | Field mustard | cytosol | 53.13 | 52.97 |
| CDX77008 | Canola | cytosol | 52.53 | 52.47 |
| KRH52752 | Soybean | nucleus | 53.03 | 52.19 |
| KRH07260 | Soybean | cytosol | 49.29 | 51.31 |
| KRH62072 | Soybean | cytosol, mitochondrion, nucleus | 23.84 | 51.19 |
| KRH74278 | Soybean | cytosol | 49.49 | 51.15 |
| KRH60226 | Soybean | cytosol | 29.39 | 51.14 |
| PGSC0003DMT400070575 | Potato | cytosol | 47.58 | 49.53 |
| Solyc05g018180.2.1 | Tomato | cytosol, nucleus | 46.77 | 48.53 |
| KRH41514 | Soybean | cytosol | 37.47 | 47.08 |
| KRH60225 | Soybean | cytosol | 17.27 | 45.6 |
| Solyc05g041240.1.1 | Tomato | endoplasmic reticulum, golgi | 12.73 | 38.89 |
| TraesCS1D01G147700.1 | Wheat | mitochondrion | 32.53 | 32.49 |
| TraesCS4D01G334500.1 | Wheat | mitochondrion | 31.41 | 30.22 |
| TraesCS2D01G215400.1 | Wheat | nucleus | 26.77 | 23.94 |
| TraesCS2D01G398800.2 | Wheat | cytosol | 22.53 | 19.63 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G200800.1 | EnsemblPlantsGene:TraesCS4D01G200800 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF4 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:348042604..348047784
Molecular Weight (calculated)
108609.0 Da
IEP (calculated)
8.590
GRAVY (calculated)
-0.233
Length
990 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSMARLLPD SRSASASASW TSSLSSDLAT AAATAVTATS SSAMPLAAPF PGLGVPLSDA DLRTTAYEVL VAASRATGGR PLIYIPQSAP SSATARSTSS
101: TSTSTSSSSS SSGLQRSRTS TAASKVKRSL GLSPSASSKA GIEAPRRPET VMELVRVNLR VTEQADSRIR RGLLRIAAGQ LGRRAESMIL PLEFLQRSKA
201: SDFPDPHEYE AWQFRNLKLL EAGLLVHPLI PLSKSDIDAQ TLREIISRAY DKSLQNGKNL ESMQELCSAV KSLAGRSLGG SSDECHWADG FPFNLHIYQM
301: LVEACFDSEN GTVVDEIDEV MGLLKKTWVI LGINQMLHNL CFTWALFNHF VTSDQVDIEL LSAAENQLNV VVKDAKNAED PDYCDVLISI LSSITGWTEK
401: RLLAYHETFN ASNIVSMQGI VTIGVSAAKI LLEDISQKHP GKRKQKTDVV RGKIETYIRS SLHTAFAQRM DEADLKRSSR NPVPVLAILA KDISDLASKE
501: KNIYSPILKK WHPLASGVAV TTLHSCFGNE LKQFMVGRTK FTPDTAQVLN AADKLEKNLV NIAVEDFLDS DDGGKSLIRQ MPPYEAENAI AALVKGWMKE
601: RVDKLKEWVD QSLQQETWNP KANRQSFAPS SMEMLRMVDE ILDAFFQLPI SMHSTLVSDL TAGLDGILQY YVSKAKACHG TQSTATPQLP HLTRCDVGSK
701: LFKKKEKPHA LLNRGSQVGS SAGKSEGCDL SELCVQINTL HYIRTEVENL KKKAKKCLRN SELSQDGNGT TDGMNIRFEL SQASCQDGIR QLCDATAHKV
801: VFSYLSHVLL DMLYVGGAAS NRVEPLLREL HSTLGVISGI MRNEPRDHLI TALMKASFDG FLLVLLAGGP TRAFTLQDAQ IIENDFRALR GLYLANGDGL
901: PHELVDKASS EVKSVLPLLR TDTESLIQRF KQAITERQGS PTKSSFPKPP RVPAQWSAND PNTILRVLCY RYDEAATKFL KKTYKFPKKL
101: TSTSTSSSSS SSGLQRSRTS TAASKVKRSL GLSPSASSKA GIEAPRRPET VMELVRVNLR VTEQADSRIR RGLLRIAAGQ LGRRAESMIL PLEFLQRSKA
201: SDFPDPHEYE AWQFRNLKLL EAGLLVHPLI PLSKSDIDAQ TLREIISRAY DKSLQNGKNL ESMQELCSAV KSLAGRSLGG SSDECHWADG FPFNLHIYQM
301: LVEACFDSEN GTVVDEIDEV MGLLKKTWVI LGINQMLHNL CFTWALFNHF VTSDQVDIEL LSAAENQLNV VVKDAKNAED PDYCDVLISI LSSITGWTEK
401: RLLAYHETFN ASNIVSMQGI VTIGVSAAKI LLEDISQKHP GKRKQKTDVV RGKIETYIRS SLHTAFAQRM DEADLKRSSR NPVPVLAILA KDISDLASKE
501: KNIYSPILKK WHPLASGVAV TTLHSCFGNE LKQFMVGRTK FTPDTAQVLN AADKLEKNLV NIAVEDFLDS DDGGKSLIRQ MPPYEAENAI AALVKGWMKE
601: RVDKLKEWVD QSLQQETWNP KANRQSFAPS SMEMLRMVDE ILDAFFQLPI SMHSTLVSDL TAGLDGILQY YVSKAKACHG TQSTATPQLP HLTRCDVGSK
701: LFKKKEKPHA LLNRGSQVGS SAGKSEGCDL SELCVQINTL HYIRTEVENL KKKAKKCLRN SELSQDGNGT TDGMNIRFEL SQASCQDGIR QLCDATAHKV
801: VFSYLSHVLL DMLYVGGAAS NRVEPLLREL HSTLGVISGI MRNEPRDHLI TALMKASFDG FLLVLLAGGP TRAFTLQDAQ IIENDFRALR GLYLANGDGL
901: PHELVDKASS EVKSVLPLLR TDTESLIQRF KQAITERQGS PTKSSFPKPP RVPAQWSAND PNTILRVLCY RYDEAATKFL KKTYKFPKKL
0001: MVRHSRRESF FDMVGFEVCP DTDLLWPFGK LDGLDRDEIR ETAYEIFFAA CRSSPGFGGR NALTFYSKHN AGDHQGDGIG GGGGSGSSNG SGFGSLGRKE
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
0101: VLTTPTSRVK RALGLKMLKR SPSRRMSTVG TVVGAVSAPS SPGNNGSIGS GSGHFSPGAG FFTVPPARPR RPLTSAEIMR QQMKVTEQSD TRLRKTLMRT
0201: LVGQTGRRAE TIILPLELLR HVKPSEFGDV HEYQIWQRRQ LKVLEAGLLI HPSIPLEKTN NFAMRLREII RQSETKAIDT SKNSDIMPTL CNLVASLSWR
0301: NATPTTDICH WADGYPLNIH LYVALLQSIF DIRDETLVLD EIDELLELMK KTWIMLGITR AIHNLCFTWV LFHQYIVTSQ MEPDLLGASH AMLAEVANDA
0401: KKSDREALYV KLLTSTLASM QGWTEKRLLS YHDYFQRGNV GLIENLLPLA LSSSKILGED VTISQMNGLE KGDVKLVDSS GDRVDYYIRA SIKNAFSKVI
0501: ENMKAEIEET EEGEEEAATM LLRLAKETED LALRESECFS PILKRWHLVA AGVASVSLHQ CYGSILMQYL AGRSTITKET VEVLQTAGKL EKVLVQMVAE
0601: NSDECEDGGK GLVREMVPYE VDSIILRLLR QWIEEKLQTV QECLSRAKEA ETWNPKSKSE PYAQSAGELM KLANDAIEEF FEIPIGITED LVHDLAEGLE
0701: KLFQEYTTFV ASCGSKQSYI PTLPPLTRCN RDSKFVKLWK KATPCAASGE ELNQMGEAPG GNHPRPSTSR GTQRLYIRLN TLHFLSSQLH SLNKSLSLNP
0801: RVLPATRKRC RERTKSSSYF EFTQAGIESA CQHVSEVAAY RLIFLDSYSV FYESLYPGDV ANGRIKPALR ILKQNLTLMT AILADKAQAL AMKEVMKASF
0901: EVVLTVLLAG GHSRVFCRTD HDLIEEDFES LKKVYCTCGE GLIPEEVVDR EAETVEGVIQ LMGQPTEQLM EDFSIVTCES SGMGLVGTGQ KLPMPPTTGR
1001: WNRSDPNTIL RVLCYRDDRV ANQFLKKSFQ LGKRR
Arabidopsis Description
F19P19.6 protein [Source:UniProtKB/TrEMBL;Acc:P93812]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.