Factsheet for Solyc08g066600.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005705	Potato	mitochondrion	97.9	97.7
KRH62073	Soybean	cytosol, peroxisome	41.48	78.86
VIT_04s0008g03350.t01	Wine grape	mitochondrion	75.45	74.63
AT2G25800.1	Thale cress	plastid	73.45	74.27
CDY35337	Canola	cytosol	71.94	73.12
KRH52752	Soybean	nucleus	73.45	72.86
CDX77008	Canola	cytosol	72.34	72.86
Bra034270.1-P	Field mustard	cytosol	72.44	72.81
KRH62072	Soybean	cytosol, mitochondrion, nucleus	32.46	70.28
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	59.52	67.19
GSMUA_Achr6P26320_001	Banana	cytosol	57.62	65.71
Zm00001d020178_P002	Maize	plastid	64.63	65.68
GSMUA_Achr4P08290_001	Banana	cytosol	52.4	65.62
Os09t0346700-01	Rice	plasma membrane	64.73	65.58
Zm00001d005638_P001	Maize	plastid	64.23	65.27
EER98780	Sorghum	plastid	63.73	64.37
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	62.83	64.04
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	62.83	64.04
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	62.63	63.84
Solyc05g018180.2.1	Tomato	cytosol, nucleus	57.31	59.96
Os08t0390100-01	Rice	cytosol, plastid	38.88	57.65
HORVU5Hr1G041860.5	Barley	plastid	56.31	57.17
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	53.01	56.04
OQU80385	Sorghum	cytosol	45.99	55.3
HORVU4Hr1G057790.4	Barley	plastid	54.41	55.13
TraesCS4B01G199800.1	Wheat	plastid	54.61	54.99
Solyc05g041240.1.1	Tomato	endoplasmic reticulum, golgi	17.74	54.63
TraesCS4D01G200800.1	Wheat	plastid	54.11	54.55
TraesCS4A01G104100.2	Wheat	cytosol	54.61	54.39
Zm00001d032274_P001	Maize	plastid	49.9	53.66
Solyc09g090480.2.1	Tomato	cytosol	39.68	38.86
Solyc03g005630.2.1	Tomato	cytosol	38.58	37.6
Solyc01g096540.2.1	Tomato	cytosol, plastid	28.56	25.68
Solyc08g080520.2.1	Tomato	cytosol	25.25	22.11
Solyc02g071830.1.1	Tomato	endoplasmic reticulum, extracellular	4.61	12.81

Protein Annotations

EnsemblPlants:Solyc08g066600.2.1	EnsemblPlantsGene:Solyc08g066600.2	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772	InterPro:Munc13_1
InterPro:Munc13_dom-2	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664	PFscan:PS51258	PFscan:PS51259
SEG:seg	UniParc:UPI000276BCB8	UniProt:K4CLN6	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr8:-:55340309..55347214

Molecular Weight (calculated)

110700.0 Da

IEP (calculated)

8.490

GRAVY (calculated)

-0.278

Length

998 amino acids

Sequence
(BLAST)

001: MASLFRDRTL GYSRRDSTAA AAVSTMSLGS GATSSSRFST SSSALSPLPS PFPDLTPSLS TTDLRETAYE IFVASCRTST GKALTYIPSN SSDRSPSPSP
101: SASNSNSSSP SMQRSLTSTA ASKMKKALGL RSSSSSGIKR TEGSPGSGGK PKKPVTIGEL MRIQMKVSEN FDSRIRRALL RITAGQVGRR IESTVLPLEL
201: LQQFKAADFT DQREYDAWQK RNLKVLEAGL LLHPHIPLDK SNTAAQRLRQ IIQAALDRPI ETGRNNESMQ VLRTAVMALA NRSSDGSVFD SCHWADGLPL
301: NLRLYEILLE ACFDINDEAS IIEEVDELMD LIKKTWGILG LNQMLHNICF SWVLFNRYVA TGQVDNDLLD AADSQLAEVA KDAKTTKDPA YAKILNSTLT
401: AMLGWAEKRL LAYHDTFDAG NIESMPTIVS IGVSAARILV EDISNEYRRR RKGEVDVARS RIDTYIRSSL RTAFAQLMEK ADSSRRASRH QPNPLPVLAI
501: LAKDVGEQAC KEKEIFSPIL KRWHPFAAGV AVATLHVCYG NELKQFVSGI TELTPDTVQV LRAADKLEKD LVQIAVEDSV DSDDGGKAII REMPPFEAEG
601: AIANMVKDWI KMRIDRLKEW VDRNLQQEVW NPQASEGGFA PSAVEVLRII DETLDAFFLL PIPMHPALLP DLMSGLDRCL QYYVSKAKSG CGSRNTYVPT
701: MPALTRCTTA TKLWKKKDKT LNTKRNPQVA TINGDNSSGV LQLCVRINTF HRIRTELEVL EKRIITLLRN SESAHVEDFS NGLGKKFEIS PAACIEGIQQ
801: LSEALGYRIV FHDLSPVLWD GLYIGEPSSS RIEPFLQELE KNLTIISNTV NDRVRTRIIA DIMKASFDGF LVVLLAGGPS RIFTQQDSQI IEDDFKSLKD
901: VFWANGDGLP VDIINKYSTT VRDVLPLFRT DAESLIERFR RSTLETYGSS AKSRLPLPPT SGQWNPTEPN TLLRVLCYRN DDAASKFLKK TYNLPKKL

Best Arabidopsis Sequence Match ( AT2G25800.1 )
(BLAST)

001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL

Arabidopsis Description

Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.