Factsheet for TraesCS5D01G192300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	99.08	99.08
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	98.98	98.98
EER98780	Sorghum	plastid	87.33	86.54
HORVU5Hr1G041860.5	Barley	plastid	86.62	86.27
Zm00001d020178_P002	Maize	plastid	86.52	86.25
Os09t0346700-01	Rice	plasma membrane	86.72	86.19
Zm00001d005638_P001	Maize	plastid	86.31	86.05
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	64.86	71.83
GSMUA_Achr6P26320_001	Banana	cytosol	62.72	70.17
GSMUA_Achr4P08290_001	Banana	cytosol	55.98	68.76
TraesCS4D01G200800.1	Wheat	plastid	66.09	65.35
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	54.95	64.35
KRH62073	Soybean	cytosol, peroxisome	34.01	63.43
Solyc08g066600.2.1	Tomato	cytosol, mitochondrion, plastid	64.04	62.83
PGSC0003DMT400005705	Potato	mitochondrion	63.53	62.2
AT2G25800.1	Thale cress	plastid	62.41	61.9
CDY35337	Canola	cytosol	61.7	61.51
Bra034270.1-P	Field mustard	cytosol	62.31	61.43
CDX77008	Canola	cytosol	62.0	61.25
KRH62072	Soybean	cytosol, mitochondrion, nucleus	28.8	61.17
KRH52752	Soybean	nucleus	62.72	61.03
VIT_04s0008g03350.t01	Wine grape	mitochondrion	62.82	60.95
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	56.79	58.9
AT2G20010.2	Thale cress	nucleus	56.38	57.98
Bra039035.1-P	Field mustard	cytosol	56.28	57.88
CDY40469	Canola	cytosol	56.18	57.83
CDY35919	Canola	cytosol	56.08	57.67
KRH60226	Soybean	cytosol	33.09	56.94
KRH74278	Soybean	cytosol	55.67	56.89
KRH07260	Soybean	cytosol	55.26	56.89
PGSC0003DMT400070575	Potato	cytosol	52.91	54.47
Solyc05g018180.2.1	Tomato	cytosol, nucleus	52.5	53.88
KRH41514	Soybean	cytosol	42.49	52.79
KRH60225	Soybean	cytosol	19.61	51.2
Solyc05g041240.1.1	Tomato	endoplasmic reticulum, golgi	14.3	43.21
TraesCS1D01G147700.1	Wheat	mitochondrion	35.14	34.71
TraesCS4D01G334500.1	Wheat	mitochondrion	36.06	34.31
TraesCS2D01G215400.1	Wheat	nucleus	28.19	24.93
TraesCS2D01G398800.2	Wheat	cytosol	24.21	20.86

Protein Annotations

EnsemblPlants:TraesCS5D01G192300.1	EnsemblPlantsGene:TraesCS5D01G192300	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772	InterPro:Munc13_1
InterPro:Munc13_dom-2	ncoils:Coil	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664	PFscan:PS51258
PFscan:PS51259	SEG:seg	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:-:295069090..295074945

Molecular Weight (calculated)

107611.0 Da

IEP (calculated)

8.127

GRAVY (calculated)

-0.266

Length

979 amino acids

Sequence
(BLAST)

001: MARLFRDPRR DSASSSSNGF APPAASPAAS ALPSPFPDLG VQLSAAELRE TAYEVLVAAS RTTGGKPLTY IPQAGPASPA SVSSASSVNS SSSSLQRSLT
101: SAAASKMKKA LGLKSSASSK GGSPGSGGAG VKAAPRRPAT VGELMRAQMR VSEPADARIR RGLLRIAAGQ LGRRAEAMVL PLEFLQQFKA SDFPDLQEHE
201: AWQGRNLKLI EAGLLVHPFV PLNKSDSSAQ RLKQIIRGAY DRPLETGKNS ESMQVLRTAV MSLAGRSHDG TSDGCHWADG FPLNLHLYQM LVEACFDSDD
301: STVVDEIDEV IELLKKTWVI LGINQMLHNL CFAWALFNHF VMSGQVDIEL LSAAENQLVE VAKDAKTTKD PNYCKVLSST LSSIMGWTEK RLLAYHETFN
401: TSNIESMQGI VSIGVTAAKV LVEDISHEYR RRRKEETDVA RSRIETYVRS SLRTAFAQRM EEADSKRSSR NPTPVMSILA KDIGDLAIKE KNLYSPILKT
501: WHPLASGVAV ATLHSCYGSE LKQFIAGLTE LTPETVQVLK SADKLEKDLV NIAVEDSVDS DDGGKSLIRE MPPYEAENAI ANLVKVWIKE RVDRLKGWVD
601: RNLKQETWSP GANRDNFAPS SVEMLRIIGE TLDAFFELPI PMHPALLPDL TAGLDRSLQL YVSKAKSGCG SRSSFMPELP PLTRCEVGSK LLFKKKEKPQ
701: NPQHRGPQNG ATNGTDPLGL PQLCVRLNTL QYIRSELENL EKKIKTCLRN VESAQADITN GLEFKFELCQ AACQEGIQHL CETTAYKVTF FDLGHILWDT
801: LYIGDIASSR VDLLLRELDP ILETISGTVH IKVRNRAITA LMKATFDGFL LVILAGGPLR AFTRQDSQII EGDFRSLRDL FLADGDGLPE ELVDKASSQV
901: KNVLPLLRTE SEGLIERFKR LIAESDQSRT ASRGKLPMPT TTGHWSPNDA NTVLRVLCYR HEEAATRFLK KTYGLPKKL

Best Arabidopsis Sequence Match ( AT2G25800.1 )
(BLAST)

001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL

Arabidopsis Description

Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.