CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020178_P002	Maize	plastid	95.85	96.44
Zm00001d005638_P001	Maize	plastid	95.04	95.62
Os09t0346700-01	Rice	plasma membrane	88.66	88.93
TraesCS5D01G192300.1	Wheat	mitochondrion, plastid	86.54	87.33
TraesCS5B01G185400.1	Wheat	mitochondrion, plastid	86.03	86.82
TraesCS5A01G187000.1	Wheat	mitochondrion, plastid	85.93	86.72
HORVU5Hr1G041860.5	Barley	plastid	77.63	78.03
GSMUA_Achr3P16260_001	Banana	cytosol, mitochondrion	65.79	73.53
GSMUA_Achr6P26320_001	Banana	cytosol	62.25	70.29
GSMUA_Achr4P08290_001	Banana	cytosol	56.17	69.64
OQU80385	Sorghum	cytosol	56.48	67.23
VIT_11s0016g03330.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	55.57	65.67
KRH62073	Soybean	cytosol, peroxisome	34.11	64.19
Solyc08g066600.2.1	Tomato	cytosol, mitochondrion, plastid	64.37	63.73
PGSC0003DMT400005705	Potato	mitochondrion	63.77	63.0
CDY35337	Canola	cytosol	62.25	62.63
AT2G25800.1	Thale cress	plastid	62.45	62.51
CDX77008	Canola	cytosol	62.65	62.46
Bra034270.1-P	Field mustard	cytosol	62.75	62.44
VIT_04s0008g03350.t01	Wine grape	mitochondrion	63.26	61.94
KRH52752	Soybean	nucleus	62.55	61.43
KRH62072	Soybean	cytosol, mitochondrion, nucleus	28.64	61.39
AT2G20010.2	Thale cress	nucleus	57.09	59.24
CDY40469	Canola	cytosol	56.88	59.1
Bra039035.1-P	Field mustard	cytosol	56.88	59.03
GSMUA_Achr4P15490_001	Banana	golgi, plasma membrane	56.38	59.0
CDY35919	Canola	cytosol	56.68	58.82
KRH07260	Soybean	cytosol	56.17	58.36
KRH74278	Soybean	cytosol	56.38	58.14
KRH60226	Soybean	cytosol	33.4	58.0
PGSC0003DMT400070575	Potato	cytosol	53.74	55.84
Solyc05g018180.2.1	Tomato	cytosol, nucleus	53.54	55.45
KRH41514	Soybean	cytosol	42.91	53.81
KRH60225	Soybean	cytosol	20.04	52.8
Solyc05g041240.1.1	Tomato	endoplasmic reticulum, golgi	14.37	43.83
EER92892	Sorghum	mitochondrion	37.25	35.11
OQU91659	Sorghum	cytosol	26.21	34.21
EES18963	Sorghum	mitochondrion	33.81	31.9
KXG21868	Sorghum	cytosol	29.05	25.95
KXG26932	Sorghum	cytosol	24.09	20.82

Protein Annotations

EnsemblPlants:EER98780	EnsemblPlantsGene:SORBI_3002G177400	EntrezGene:8055553	InterPro:DUF810	InterPro:IPR014770	InterPro:IPR014772
InterPro:Munc13_1	InterPro:Munc13_dom-2	ncoils:Coil	PANTHER:PTHR31280	PANTHER:PTHR31280:SF15	PFAM:PF05664
PFscan:PS51258	PFscan:PS51259	ProteinID:EER98780	ProteinID:EER98780.1	RefSeq:XP_002462259.1	SEG:seg
UniParc:UPI0001A83DEB	UniProt:C5XAK3	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:55715331..55721173

Molecular Weight (calculated)

108744.0 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.280

Length

988 amino acids

Sequence
(BLAST)

001: MARLFRESRR DSSHSSSSNG FLPPAAASTP SSASASALPS PFPDLGVALS AADLREAAYE VLVAASRTTG SKPLTYIPQS SSVAATAGAQ ASSPASSSAS
101: SASSASLQRS LTSAAASKMK KALGLRSSAS SKGVGSPGSG GKAATPRRPA TVGELMRVQM RISEPADSRI RRGLLRIAAS QLGRRAESMV LPLEFLQQFK
201: ASDFPDPQEY EAWRSRNLKL LEAGLLVHPL VPLNKSDSSV QRLRQIIRGA YDRPLETGKN SESMQGLRTS VMSLAGRSHD GTSDGCHWAD GFPLNLHLYQ
301: MLVEACFDND EGTVVDEIDE VMELLKKTWV ILGINELLHN LCFTWALFNH FVMSGQVDIE LLSVAENQLA EVAKDAKTTK DPNYCKVLSS TLSSIMGWTE
401: KRLLAYHETF NTSNIESMQG IVSIGVSAAR VLVEDISHEY RRRRKEDTDV ARSRVETYIR SSLRTAFAQR MEEADSKRSS RNPTPVLSIL AKDIGDLAMK
501: EKNLYSPILK TWHPLASGVA VATLHSCYGN ELKQFVAGLT ELTPDTVQVL KSADKLEKDL VNIAVEDSVD SDDGGKSLIR EMPPYEAENA IANLVKVWIK
601: ERVDRLKGWV DRNLKQETWN PGANRENFAP SSVEMLRVIG ETLDAFFQLP IPMHPVLLPD LTAGLDRSLQ LYVAKVKSGC GTRSSFMPQL PPLTRCEVGS
701: KLLFKKKEKP QNLQVRVSQN GAANGNDPLG LPQLCVRLNT LQYIRGELEN LEKKIKTSLR NVESAQADIT DGLDIKFELC QAACQEGIQQ ICETTAYKVT
801: FYDLGHVLWD TLYVGDTASN RVEVLLRELD PVLETISGMV HNKVRNRAIT ALMKATFDGF LLVLLAGGPL RAFTRQDSQI IEDDFRALRD LYLADGDGLP
901: EELVDKASSQ VKNVLPLFRA DSESLIERFK RMVVESNRSV SKNKLPLPPT TGHWSPNEPN TVLRVLCYRS DETATKFLKK TYSLPKKI

Best Arabidopsis Sequence Match ( AT2G25800.1 )
(BLAST)

001: MAHLFRELSL GHSKRESTPP PPSHSATSRS SSMSSDLPPS PLGQLAVQLS DSDLRLTAYE IFVAACRSAT GKPLSSAVSV AVLNQDSPNG SPASPAIQRS
101: LTSTAASKMK KALGLRSSSS LSPGSNKSSG SASGSNGKSK RPTTVGELMR IQMRVSEAVD SRVRRAFLRI AASQVGRKIE SVVLPLELLQ QLKSSDFTDQ
201: QEYDAWLKRS LKVLEAGLLL HPRVPLDKTN SSQRLRQIIH GALDRPLETG RNNEQMQSLR SAVMSLATRS DGSFSDSCHW ADGSPFNLRL YELLLEACFD
301: SNDATSMVEE VDDLMEHIKK TWVILGINQM LHNLCFTWLL FSRYVVTGQV EMDLLHACDS QLAEVAKDAK TTKDPEYSQV LSSTLSAILG WAEKRLLAYH
401: DTFDRGNIHT MEGIVSLGVS AARILVEDIS NEYRRRRKGE VDVARTRIET YIRSSLRTSF AQRMEKADSS RRASRNQKNP LPVLAILAKD IGELAIQEKR
501: MFSPILKRWH PFAAGVAVAT LHVCYGNEIK QFIAGISELT PDAVQILRAA DKLEKDLVQI AVEDSVDSDD GGKAIIREMP PFEAETVIAN LVKDWIKARI
601: DRLKEWVDRN LQQEVWKPLE NLEGGYAQSA AEVLRITDET LEAFFQLPIP MHPAVLPDLI IGLDKYLQYY VSKAKSGCGS RTTYMPTMPA LTRCTTGSKF
701: QWKKKEKTPT TQKRESQVSV MNGENSFGVT QICVRINSLH KIRSELDVVE KRVITHLRNC ESAHTDDFSN GLEKKFELTP AACIEGVQQL SESLAYKVVF
801: HDLSHTLWDG LYIGDLSSSR IDPFLKELEQ NLTVIAETVH ERVRTRIITD IMRASLDGFL LVLLAGGPSR AFTRQDSQIM EEDFKSMKDM FWANGDGLAM
901: DLIDKFSTTV RGVLPLFSTD TDSLIERFKG TTLEAYGSSA KSRLPLPPTS GQWNGMEPNT LLRVLCYRND ESATRFLKKT YNLPKKL

Arabidopsis Description

Elongation factor Ts (DUF810) [Source:UniProtKB/TrEMBL;Acc:Q0WQB7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.