Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G111640.2 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06970.1 | HORVU2Hr1G111640.2 | AT2G18960.1 | 24163289 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G215400.1 | Wheat | nucleus | 94.98 | 46.16 |
| TraesCS1A01G052200.3 | Wheat | cytosol, mitochondrion, nucleus | 94.8 | 46.11 |
| TraesCS1B01G069300.2 | Wheat | nucleus | 94.61 | 45.24 |
| GSMUA_Achr2P01140_001 | Banana | cytosol | 68.03 | 44.96 |
| KXG21868 | Sorghum | cytosol | 86.06 | 41.86 |
| Zm00001d037867_P001 | Maize | cytosol | 85.69 | 39.44 |
| VIT_13s0084g00630.t01 | Wine grape | cytosol | 66.91 | 31.97 |
| Bra009303.1-P | Field mustard | cytosol, peroxisome, plastid | 63.94 | 31.94 |
| CDX69997 | Canola | cytosol, peroxisome, plastid | 63.94 | 31.88 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 63.94 | 31.65 |
| KRH13315 | Soybean | cytosol, endoplasmic reticulum, nucleus | 64.87 | 31.61 |
| KRH20669 | Soybean | endoplasmic reticulum | 64.5 | 31.49 |
| Solyc01g096540.2.1 | Tomato | cytosol, plastid | 64.87 | 31.44 |
| AT5G06970.1 | Thale cress | cytosol | 64.31 | 31.43 |
| PGSC0003DMT400004282 | Potato | extracellular | 13.01 | 26.92 |
| HORVU2Hr1G041800.16 | Barley | cytosol | 17.84 | 22.17 |
| Solyc02g071830.1.1 | Tomato | endoplasmic reticulum, extracellular | 12.83 | 19.22 |
| HORVU5Hr1G041860.5 | Barley | plastid | 29.93 | 16.38 |
| HORVU1Hr1G039810.1 | Barley | mitochondrion | 29.93 | 16.33 |
| HORVU4Hr1G057790.4 | Barley | plastid | 29.0 | 15.84 |
| HORVU4Hr1G083660.3 | Barley | mitochondrion | 29.37 | 15.34 |
| Os03t0683700-02 | Rice | plasma membrane | 2.23 | 4.62 |
| HORVU2Hr1G095440.1 | Barley | cytosol, extracellular | 0.93 | 3.45 |
| HORVU2Hr1G127720.4 | Barley | cytosol | 0.93 | 3.09 |
| KRH13324 | Soybean | cytosol | 0.74 | 3.05 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G041780.2 | EnsemblPlantsGene:HORVU2Hr1G041780 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:Munc13_1 | PANTHER:PTHR31280 |
| PANTHER:PTHR31280:SF2 | PFAM:PF05664 | PFscan:PS51258 | SEG:seg | UniParc:UPI000B460337 | UniProt:A0A287HTM7 |
| MapMan:21.1.1.3.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:208417605..208426053
Molecular Weight (calculated)
61291.3 Da
IEP (calculated)
6.565
GRAVY (calculated)
-0.209
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLGRSKSE SAEVQTHRQP GLVGLLEILR AQLEITESMD IRTRQGLLNA MVGKVGKRMD NLLIPLELLC CISRAEFSDM KAYLRWQKRQ LNMLEEGLIN
101: HPIVGFGELG RKVNELRNLF RKIEESESLS PSAAEVQRTE CLRSLREVAT SFSERPARGD LTGEVCHWAD GYHLNAALYE KMLGSVFDTL DEGKLTEEVE
201: EILELLKSTW RILGITETIH DTCYAWVLFR QFVFTGEQGL LKVVIEHLRK IPLKEQRGPQ ERLHLKSLRS SVDADDSCQD FTFFQSFLSP VQKWVDKKLN
301: DYHLHFSEGS SMMVDIVTVA MLTRRILGEE NDKAMESPDR DQIDRYITSS VKSAFMKIAH SIEIKADTSH EHVLASLAEE TKKLLKIEAN IFSPVLSRWH
401: PQAAVLSASL LHKLYGNKLG PFLEHAEHLT EDVVSVFPAA DSLEQYIMSV MASVVGDDGL DSLCRQKLVP YEIESKSGTV VLRWVNGQLE RVETWVKRAA
501: EQEIRWRRII LLQVGLLPLG IFPLSLWKPF QPLGLPHP
101: HPIVGFGELG RKVNELRNLF RKIEESESLS PSAAEVQRTE CLRSLREVAT SFSERPARGD LTGEVCHWAD GYHLNAALYE KMLGSVFDTL DEGKLTEEVE
201: EILELLKSTW RILGITETIH DTCYAWVLFR QFVFTGEQGL LKVVIEHLRK IPLKEQRGPQ ERLHLKSLRS SVDADDSCQD FTFFQSFLSP VQKWVDKKLN
301: DYHLHFSEGS SMMVDIVTVA MLTRRILGEE NDKAMESPDR DQIDRYITSS VKSAFMKIAH SIEIKADTSH EHVLASLAEE TKKLLKIEAN IFSPVLSRWH
401: PQAAVLSASL LHKLYGNKLG PFLEHAEHLT EDVVSVFPAA DSLEQYIMSV MASVVGDDGL DSLCRQKLVP YEIESKSGTV VLRWVNGQLE RVETWVKRAA
501: EQEIRWRRII LLQVGLLPLG IFPLSLWKPF QPLGLPHP
0001: MEEENAVEIL QRYRRDRRKL LDFMLAGSLI KKVIMPPGAV TLDDVDLDQV SVDYVINCAK KGGMLELAEA IRDYHDHIGL PYMNSVGTAD EFFLATIPES
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
Arabidopsis Description
PATROL1Protein unc-13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RX56]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.