Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009303.1-P | Field mustard | cytosol, peroxisome, plastid | 99.72 | 99.91 |
| CDX99020 | Canola | cytosol, peroxisome, plastid | 99.35 | 98.62 |
| AT5G06970.1 | Thale cress | cytosol | 93.33 | 91.46 |
| KRH13324 | Soybean | cytosol | 9.08 | 74.81 |
| KRH13315 | Soybean | cytosol, endoplasmic reticulum, nucleus | 71.36 | 69.75 |
| KRH20669 | Soybean | endoplasmic reticulum | 71.18 | 69.69 |
| VIT_13s0084g00630.t01 | Wine grape | cytosol | 71.27 | 68.29 |
| Solyc01g096540.2.1 | Tomato | cytosol, plastid | 69.32 | 67.39 |
| GSMUA_Achr2P01130_001 | Banana | extracellular, golgi | 20.02 | 67.29 |
| Os03t0683700-02 | Rice | plasma membrane | 15.48 | 64.23 |
| HORVU2Hr1G041780.2 | Barley | cytosol | 31.88 | 63.94 |
| GSMUA_Achr2P01140_001 | Banana | cytosol | 47.54 | 63.02 |
| KXG21868 | Sorghum | cytosol | 64.6 | 63.02 |
| HORVU2Hr1G041800.16 | Barley | cytosol | 25.12 | 62.59 |
| TraesCS2D01G215400.1 | Wheat | nucleus | 63.48 | 61.88 |
| TraesCS1A01G052200.3 | Wheat | cytosol, mitochondrion, nucleus | 63.3 | 61.75 |
| TraesCS1B01G069300.2 | Wheat | nucleus | 63.02 | 60.44 |
| Zm00001d037867_P001 | Maize | cytosol | 64.32 | 59.37 |
| PGSC0003DMT400004282 | Potato | extracellular | 10.19 | 42.31 |
| Solyc02g071830.1.1 | Tomato | endoplasmic reticulum, extracellular | 11.77 | 35.38 |
| CDX86760 | Canola | cytosol | 32.72 | 31.55 |
| CDY59387 | Canola | cytosol | 17.24 | 30.05 |
| CDY40469 | Canola | cytosol | 25.86 | 29.34 |
| CDY35919 | Canola | cytosol | 25.76 | 29.2 |
| CDX77008 | Canola | cytosol | 25.67 | 27.95 |
| CDY35337 | Canola | cytosol | 25.39 | 27.9 |
| CDY59176 | Canola | cytosol | 24.75 | 27.5 |
| CDY53192 | Canola | cytosol | 24.75 | 27.5 |
| CDY37722 | Canola | mitochondrion | 23.08 | 27.27 |
| CDX84688 | Canola | cytosol | 24.56 | 26.66 |
| CDX79528 | Canola | cytosol | 24.47 | 26.59 |
| CDX89822 | Canola | cytosol | 25.21 | 26.54 |
| CDY23738 | Canola | cytosol | 24.47 | 26.48 |
| CDY18234 | Canola | cytosol | 25.12 | 26.44 |
Protein Annotations
| EnsemblPlants:CDX69997 | EnsemblPlantsGene:GSBRNA2T00136087001 | InterPro:DUF810 | InterPro:IPR014770 | InterPro:IPR014772 | InterPro:Munc13_1 |
| InterPro:Munc13_dom-2 | PANTHER:PTHR31280 | PANTHER:PTHR31280:SF2 | PFAM:PF05664 | PFscan:PS51258 | PFscan:PS51259 |
| ProteinID:CDX69997 | ProteinID:CDX69997.1 | SEG:seg | UniParc:UPI0004EDDF1C | MapMan:21.1.1.3.2 | : |
Description
BnaA10g23460D
Coordinates
chrLK031790:-:2624570..2632294
Molecular Weight (calculated)
121598.0 Da
IEP (calculated)
5.774
GRAVY (calculated)
-0.288
Length
1079 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLAGSLIKKV IMPPGAVTLD DVDLDQVSVD YVINCAKKGG MLELSEAIRD YHDHSGLPYM NSVGTADDFF LATTPESSGS PPKRAPPPIP ILTSASSSSI
0101: PTNPEWCESP SAPPLMRSES IDSPHAQELT VDDIEDFEDD DDNEEVGNFR ISRRTANDAA DLVPKLPSFA TGITDDDLRE TAFEILLACA GASGGLIVPS
0201: KEKKNEKRRS RLIKKLGRKS ESVSQSQSSS GLVSLLEMMR GQMEISEAMD IRTRQGLLNA LAGKAGKRMD SLLVPLELLC CVSRTEFSDK KAYLRWQKRQ
0301: LNMLAEGLIN HPVVGFGESG RKANDLKSLL QRIEESESLP SSAGEVQRAE CLKSLTEVAI SLAERPARGD LTGEVCHWAD GYHLNVRLYE KLLLCVFDML
0401: NEGKLTEEVE EILELLKSTW RVLGITETIH YTCYAWVLFR QYVITSERGL LRHAIQQLKK IPLKEQRGPQ ERIHLKTLQC RVENEEISFL ESFLSPIRSW
0501: ADKQLGDYHL HFAEGSLVME DTVTVAMITW RLLLEESDRA MHSSSSDREQ IESYISSSIK NTFTRMSLTI DRSDRINEHP LALLAEETKK LMKKDSTVFM
0601: PILSQRHPQA IAFSASLIHK FYGNKLKPFL DGTEHLTEDV VSVFPPADSL EQYLLELMTS VCGEDTNGPY FRKLIPYELE SLSGTLVLRW INAQLGRILS
0701: WVERAFKQEH WDPISAQQRH GSSIVEVFRI VEETVDQFFE LKVPMRSIEL SALLRGIDNA FQVYTNHVME KLGSKDDLVP PVPVLTRYKK EAAIKVFVKK
0801: ELFESKLPDE RWSTNIDVPA TAVLCVQLNT LHYAVSQLSK LEDSIWERWI AKRPREKIVI RKSLVEKTKS VNQKESFEGS RKDINAALDR ICEFTGTKII
0901: FCDLREPFIE NLYKPSVSQS RLEALIEALD TELGQLCTVI MEPLRDRIVT SLLQASLDGL LRVLLDGGPS RVFHPSESKL LEEDVEVLKE FFISGGDGLP
1001: RGVVENQIAR VRLVVKLHGY ETRELIDDLR SRSSLDMQQG GRGKLGADTQ TLVRVLCHRN DSEASLFLKK QYKIPKSHA
0101: PTNPEWCESP SAPPLMRSES IDSPHAQELT VDDIEDFEDD DDNEEVGNFR ISRRTANDAA DLVPKLPSFA TGITDDDLRE TAFEILLACA GASGGLIVPS
0201: KEKKNEKRRS RLIKKLGRKS ESVSQSQSSS GLVSLLEMMR GQMEISEAMD IRTRQGLLNA LAGKAGKRMD SLLVPLELLC CVSRTEFSDK KAYLRWQKRQ
0301: LNMLAEGLIN HPVVGFGESG RKANDLKSLL QRIEESESLP SSAGEVQRAE CLKSLTEVAI SLAERPARGD LTGEVCHWAD GYHLNVRLYE KLLLCVFDML
0401: NEGKLTEEVE EILELLKSTW RVLGITETIH YTCYAWVLFR QYVITSERGL LRHAIQQLKK IPLKEQRGPQ ERIHLKTLQC RVENEEISFL ESFLSPIRSW
0501: ADKQLGDYHL HFAEGSLVME DTVTVAMITW RLLLEESDRA MHSSSSDREQ IESYISSSIK NTFTRMSLTI DRSDRINEHP LALLAEETKK LMKKDSTVFM
0601: PILSQRHPQA IAFSASLIHK FYGNKLKPFL DGTEHLTEDV VSVFPPADSL EQYLLELMTS VCGEDTNGPY FRKLIPYELE SLSGTLVLRW INAQLGRILS
0701: WVERAFKQEH WDPISAQQRH GSSIVEVFRI VEETVDQFFE LKVPMRSIEL SALLRGIDNA FQVYTNHVME KLGSKDDLVP PVPVLTRYKK EAAIKVFVKK
0801: ELFESKLPDE RWSTNIDVPA TAVLCVQLNT LHYAVSQLSK LEDSIWERWI AKRPREKIVI RKSLVEKTKS VNQKESFEGS RKDINAALDR ICEFTGTKII
0901: FCDLREPFIE NLYKPSVSQS RLEALIEALD TELGQLCTVI MEPLRDRIVT SLLQASLDGL LRVLLDGGPS RVFHPSESKL LEEDVEVLKE FFISGGDGLP
1001: RGVVENQIAR VRLVVKLHGY ETRELIDDLR SRSSLDMQQG GRGKLGADTQ TLVRVLCHRN DSEASLFLKK QYKIPKSHA
0001: MEEENAVEIL QRYRRDRRKL LDFMLAGSLI KKVIMPPGAV TLDDVDLDQV SVDYVINCAK KGGMLELAEA IRDYHDHIGL PYMNSVGTAD EFFLATIPES
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
0101: SGSPPKRAPP PIPVLISSSS PMVTNPEWCE SPSAPPLMRS ESFDSPKAQE LTVDDIDDFE DDDDLDEVGN FRISRRTAND AADLVPRLPS FATGITDDDL
0201: RETAFEILLA CAGASGGLIV PSKEKKKEKS RSRLIKKLGR KSESVSQSQS SSGLVSLLEM MRGQMEISEA MDIRTRQGLL NALAGKVGKR MDSLLVPLEL
0301: LCCVSRTEFS DKKAYLRWQK RQLNMLAEGL INNPVVGFGE SGRKATDLKS LLLRIEESES LPSSAGEVQR AECLKSLREV AISLAERPAR GDLTGEVCHW
0401: ADGYHLNVRL YEKLLLCVFD ILNDGKLTEE VEEILELLKS TWRVLGITET IHYTCYAWVL FRQYVITSER GLLRHAIQQL KKIPLKEQRG PQERLHLKTL
0501: KCRVDNEEIS FLESFLSPIR SWADKQLGDY HLHFAEGSLV MEDTVTVAMI TWRLLLEESD RAMHSNSSDR EQIESYVLSS IKNTFTRMSL AIDRSDRNNE
0601: HHLALLAEET KKLMKKDSTI FMPILSQRHP QAIAFSASLI HKLYGNKLKP FLDGAEHLTE DAVSVFPAAD SLEQYLLELM TSVCGEDTSG PYFKKLIPYE
0701: VESLSGTLVL RWINSQLGRI LSWVERAYKQ EHWDPISPQQ RYGSSIVEVF RIVEETVDQF FALKVPMRSI ELSALFRGID NAFQVYTNHV MEKLASKDDL
0801: VPPVPVLTRY KKETAIKVFV KKELFDSKHL DERRSINIDV PATAMLCVQL NTLHYAVSQL SKLEDSMWLR WIAKKPREKI VIRKSMVEKS KSFNQKESFE
0901: GSRKDINAAL DRICEFTGTK IIFCDLREPF IENLYKPNVS QSRLEGLIEA LDTELGQLCS VIMEPLRDRI VTSLLQASLD GLLRVLLDGG ASRVFHPSES
1001: KLLEEDVEVL KEFFISGGDG LPRGVVENQV ARVRLVVKLH GYETRELIDD LRSRSSLEMQ QGGKGKLGAD TQTLVRVLCH RNDSEASQFL KKQYKIPRSH
1101: G
Arabidopsis Description
PATROL1Protein unc-13 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q8RX56]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.